PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82252.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 402aa    MW: 43781.4 Da    PI: 6.5758
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.94e-11147223271
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                 W+ +   aLi+a+r       em++++ r k ++ +W +v+ ++++ g+ r+   C +kw+nl +++kk+ + ++  
  GBG82252.1 147 WSVDDNIALIRAKRdqdaylqEMGHAYARMKPREWKWLDVATRLKKVGVDRETDWCGKKWDNLMQKFKKVHHFQGLS 223
                 8888899*******777777777777777899**************************************9988764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MQSPSPLSAG SSAGRRVGEC RETAPTVADV GDARDGREVW AEQRRLMRSV REESITRGVQ  60
RLHVGEDGHD GEEAGADAHD PDWNDNGAEG WEDDAGNISP SKQAAAMGGR GGKTKSCGGN  120
GRRGKRTAGK GSDAEGDVDG EGGRHFWSVD DNIALIRAKR DQDAYLQEMG HAYARMKPRE  180
WKWLDVATRL KKVGVDRETD WCGKKWDNLM QKFKKVHHFQ GLSEKQDFFQ LSGKDRMSKG  240
FSFNMDRAVY NEILGSTAKN HTINPKNVAD TGAQGGVRLP SASSADPESV GDGDGGAEHD  300
DDDDGSTKGF SQTTGGAGSF GKRKSTRQQT FEAMTEYMEK HGALMASTME SNNKCHCSIA  360
IRQCEALKAE IEVLKKHYAA PDEVSKLMCH ALLEIAKAID KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-08Trihelix family protein