PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76991.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 547aa MW: 60942.4 Da PI: 4.6027

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.5	1.3e-11	299	364	9	67
trihelix 9 aLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 aLi+a+r+ + +++ r k ++ +W++v+++++ g+ r +++C +kw+nl +++kk+ + GBG76991.1 299 ALIRAKRDQDAHMQgmghayaRMKPRGWKWQDVAQRLKNVGVDRDAEKCGKKWDNLMQQFKKVHHF 364 79999997777776443333367899************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MIKDRVQKPL ESVAEYRNRF YRMFVKTERE GAAERIPPSQ QQYLDPRTVR DLAFFGHPTA 60 EQFAAIREEE EEEESTSSDE DEDAREEGGD SDEELGGEDE TPEEGSYSEH SEGEQSEEEE 120 EDEEGEEEHE EEPAGSDWEA VPEEALHTRC SRRLPCLQVS EVARLRGGSV DAGTDFFDVG 180 DDRDGREVWK EHRRDLRARR EETITRGVER LCVGDREKET DDPPAEADNE DKDDNDGEGG 240 EGGGGYVSLS LQSDMVRKGG KSKPSDRNSP PRAKKSQGKG RGGDDGGDAE KKRNFWSVAL 300 IRAKRDQDAH MQGMGHAYAR MKPRGWKWQD VAQRLKNVGV DRDAEKCGKK WDNLMQQFKK 360 VHHFQSPSGG ADFFQLMAKE RASRGFNFIM DRAIYDEIEG STGMNHTIHP KNVADTGASG 420 GVRLPLTSDA VPESVADGDG GAGREDDDEG STQGSSQATG TPTGFGKRKS TRQPTFDALT 480 ECMEKHGTLM ASTMESASKR QCSIQVRQCE ALKAEVEVQR KHYAASDEVS KLICHGLLEI 540 AKAIRER

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MIKDRVQKPL ESVAEYRNRF YRMFVKTERE GAAERIPPSQ QQYLDPRTVR DLAFFGHPTA  60
EQFAAIREEE EEEESTSSDE DEDAREEGGD SDEELGGEDE TPEEGSYSEH SEGEQSEEEE  120
EDEEGEEEHE EEPAGSDWEA VPEEALHTRC SRRLPCLQVS EVARLRGGSV DAGTDFFDVG  180
DDRDGREVWK EHRRDLRARR EETITRGVER LCVGDREKET DDPPAEADNE DKDDNDGEGG  240
EGGGGYVSLS LQSDMVRKGG KSKPSDRNSP PRAKKSQGKG RGGDDGGDAE KKRNFWSVAL  300
IRAKRDQDAH MQGMGHAYAR MKPRGWKWQD VAQRLKNVGV DRDAEKCGKK WDNLMQQFKK  360
VHHFQSPSGG ADFFQLMAKE RASRGFNFIM DRAIYDEIEG STGMNHTIHP KNVADTGASG  420
GVRLPLTSDA VPESVADGDG GAGREDDDEG STQGSSQATG TPTGFGKRKS TRQPTFDALT  480
ECMEKHGTLM ASTMESASKR QCSIQVRQCE ALKAEVEVQR KHYAASDEVS KLICHGLLEI  540
AKAIRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	1e-06	Trihelix family protein