PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75621.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

HB-other

Protein Properties

Length: 485aa MW: 48218.9 Da PI: 6.8016

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	51.4	1.9e-16	25	76	2	53
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 rkR ++t+e +Lee F+k++ p +e+r LA+ +g++ +qV+vWFqNrR GBG75621.1 25 RKRIKYTDEMKLILEESFQKSMFPPRETRMALAEATGISLEQVTVWFQNRRS 76 89*************************************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MAASKSRASD GDPPDGRSHV EGGARKRIKY TDEMKLILEE SFQKSMFPPR ETRMALAEAT 60 GISLEQVTVW FQNRRSGRNA AGVIAASLGA AAAKNKDYDM IGGSGAGGLR DNKEGSSSRE 120 DLVGGRPDVK AELLSAEQLR ERNGSPSSGG GGSYVCGTYG KGSAKGGGGG GGGGGGSSTS 180 RVGGGELPGG GGPGELSRVG GKIVVGGYHD QQGHSHHPHA APHIPIVSVS HLHYHNNSQS 240 RGGGGGSVPA VEDTPPPHSS RLLPPVPSPP ETAGGGVVPG IPGKPARSSS PFGGGGSVST 300 NRVLAPGASA SLPGTGGGLL LSAKMEPEGS SILGGAGFDP VATFASRVYP TPTGSGAGAA 360 CLSAAAAARE GSPGPGSTAV ALAGGYQTVM MRGRLGTPEA RQQQPLGAST GSNSGVGGSN 420 SKIEMDASGG AVVGSGTHLV YSKLPLGIGI SSAIRKDNGD DEENAEEREK KCYDGDDEEE 480 NADES

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MAASKSRASD GDPPDGRSHV EGGARKRIKY TDEMKLILEE SFQKSMFPPR ETRMALAEAT  60
GISLEQVTVW FQNRRSGRNA AGVIAASLGA AAAKNKDYDM IGGSGAGGLR DNKEGSSSRE  120
DLVGGRPDVK AELLSAEQLR ERNGSPSSGG GGSYVCGTYG KGSAKGGGGG GGGGGGSSTS  180
RVGGGELPGG GGPGELSRVG GKIVVGGYHD QQGHSHHPHA APHIPIVSVS HLHYHNNSQS  240
RGGGGGSVPA VEDTPPPHSS RLLPPVPSPP ETAGGGVVPG IPGKPARSSS PFGGGGSVST  300
NRVLAPGASA SLPGTGGGLL LSAKMEPEGS SILGGAGFDP VATFASRVYP TPTGSGAGAA  360
CLSAAAAARE GSPGPGSTAV ALAGGYQTVM MRGRLGTPEA RQQQPLGAST GSNSGVGGSN  420
SKIEMDASGG AVVGSGTHLV YSKLPLGIGI SSAIRKDNGD DEENAEEREK KCYDGDDEEE  480
NADES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	2e-08	HD-ZIP family protein