PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG74260.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family MYB_related
Protein Properties Length: 388aa    MW: 41719.9 Da    PI: 5.0079
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG74260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.9e-09198242243
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      g+WT eE e l +++++++ g   +W+ Ia+ +g+gR++ +++ +
       GBG74260.1 198 GPWTDEELEALRKGIAKFPRGtlkRWEVIAEAIGTGRSADEVVKK 242
                      89*****************99******************999765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MAEKVSHQAL GSAEFNNPIL ASSSKVAAAS MDDYDDYYEI SKPRLQVVAG AVNDRPPDLD  60
VELSNVEIAV SAAVAGALLI AAFFTSGFLQ MLCVWVALSV TIGPLAPLSH VGGDCRVGVG  120
EPVIERKPEV VEEEVPEEPL RGKAGLRKRL AASGAGARTE TVVADVDGNG DAKKSTESKV  180
SDEDSHRQSS RRPSKKGGPW TDEELEALRK GIAKFPRGTL KRWEVIAEAI GTGRSADEVV  240
KKAKEMAERK PVDGQSFMSF VAQRKKTGLE ITSEPSLRSM EDKDDSDRGG TQGEGDKEEG  300
DEDGDGGGTR ESDLWNDVQD VSLVRAMKEF PKDTAMRWER IASAVPGKTK TQCMKRFVEL  360
KKGFRGARGT GGAVGEQSKT LDLQNALI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.13e-35MYB family protein