PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70515.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 624aa MW: 67376.3 Da PI: 7.353

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.3	6e-11	343	418	1	69
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW ++e+ +L + r+ e e ++r+++k++ W+ v +m+e g+ r qCk k++++ y+++k +e+ GBG70515.1 343 RWGEEETTVLCQTRNetkallgEETEGMGRARAKAGFWKNVEHRMWESGYYRDHDQCKGKFSQVMDFYRRLKIHEG 418 8************44444444444444567************************************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MPPPKPCFAP STSSTFLQPR SIFYPMETPD ENAGLSCIVD WGYSESQYGT PRADHAQQSS 60 ALRGQAGFAP PPNASEHDVL GTQVPNSQFF GSRGHPSSVG TAVPGRGSPC RDVDATLPPP 120 LSSPRTPVAG LSYGVTVRDE NYLRQQLRMR AIAMAEGQSR DPFVVAGSRV PHLSPSHSEA 180 SRTVTPERPL AAGDCSDGPR RSLDGGSVTP PPRSSSAQGV RDSVTPPSGG GGHSRSSAQQ 240 SPGCDYIINR LVRDVEGGVF STGGSAGFIY GGLGNPDVAI RADVSPQAPP SRDGNAHAVN 300 DGAGAGGPSY VPATDVGGYG SSAGGRPQRG HVRPPDAPKN SDRWGEEETT VLCQTRNETK 360 ALLGEETEGM GRARAKAGFW KNVEHRMWES GYYRDHDQCK GKFSQVMDFY RRLKIHEGWS 420 GLPSYWDMNQ TKRKRYNVDF VLRRSWYDTI NAVEKDVDSI NLCNLWDSSV EQERWEEANK 480 GAHGGGDTEG VSEDMGGGSE GGTPTSRPTP FEPTLGKRKR TASNARETSM KAVTGAMRDH 540 TAAVTRSDRE CAKLRCDTTR DIAVKQMEVH RETVDKDIAA RERVATIGFD KMEKGYVYLA 600 DAIRSLREPR KSRTLDDSQG SGSE

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MPPPKPCFAP STSSTFLQPR SIFYPMETPD ENAGLSCIVD WGYSESQYGT PRADHAQQSS  60
ALRGQAGFAP PPNASEHDVL GTQVPNSQFF GSRGHPSSVG TAVPGRGSPC RDVDATLPPP  120
LSSPRTPVAG LSYGVTVRDE NYLRQQLRMR AIAMAEGQSR DPFVVAGSRV PHLSPSHSEA  180
SRTVTPERPL AAGDCSDGPR RSLDGGSVTP PPRSSSAQGV RDSVTPPSGG GGHSRSSAQQ  240
SPGCDYIINR LVRDVEGGVF STGGSAGFIY GGLGNPDVAI RADVSPQAPP SRDGNAHAVN  300
DGAGAGGPSY VPATDVGGYG SSAGGRPQRG HVRPPDAPKN SDRWGEEETT VLCQTRNETK  360
ALLGEETEGM GRARAKAGFW KNVEHRMWES GYYRDHDQCK GKFSQVMDFY RRLKIHEGWS  420
GLPSYWDMNQ TKRKRYNVDF VLRRSWYDTI NAVEKDVDSI NLCNLWDSSV EQERWEEANK  480
GAHGGGDTEG VSEDMGGGSE GGTPTSRPTP FEPTLGKRKR TASNARETSM KAVTGAMRDH  540
TAAVTRSDRE CAKLRCDTTR DIAVKQMEVH RETVDKDIAA RERVATIGFD KMEKGYVYLA  600
DAIRSLREPR KSRTLDDSQG SGSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-08	Trihelix family protein