PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70510.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 636aa MW: 69184.8 Da PI: 7.4725

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.6	1.6e-13	383	458	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + + aLi+a+r+ + +l+ r k +k +W +v+ ++++ g+ +++ +C +kw+nl +++kk+++ ++ GBG70510.1 383 WSVDDIIALIQAKRDQDAHLQgmghayaRMKPRKWKWLDVATRLKKVGVDKEADRCGKKWDNLMQQFKKVNHFQGL 458 99**********777766643333336789999*********************************997775 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MADVFRRLPL LPLVVLLLLL LVVFHVCILD GLPRRGRRRR CVKNNDRMEG RKAISGSAGE 60 RGGRWSVHSP SNSPRPSERS GHAHLPPHLQ PLPDTDNEEG DDRWSRTVPL GSGSTQEWTA 120 IELFGSRDSG KGQSYTELLQ QGLSDTDGDG GMNLSFGLGS GRSAAFSRTV VVNPHPDDDG 180 GDVTVVQRSP RSPAPLREAL GNNKDPPRQQ FRSPSVCGGA SARPQWMQSP SHLSAGSSAG 240 HRLGECRETA PVVADVGDAR DGREVWAEQR QLMRVWAEQR QLMRSVREES ITRGVQRLRV 300 GEDRHDGEEA VGDAHDPDWN DNGAEGGEDD ASYISPSKQA AAMGGRGGKT KSCAGNGRRG 360 KRTAGRGSDA EGDVDGEGGR HFWSVDDIIA LIQAKRDQDA HLQGMGHAYA RMKPRKWKWL 420 DVATRLKKVG VDKEADRCGK KWDNLMQQFK KVNHFQGLSG KQNFFQLSGK DRMSKGFNFN 480 MDRAVYDEIL GSTAKNHTIN PKNVADTGAQ GGVRLPSASS ADPESVGDGD GGAEHDDDDD 540 GSTKGSSQTT GGAGGFGKRK STRQQTFEAM TECMEKHGAL MASTMESNSK RHCSIAIRQC 600 EALEAEIEVQ KKHYAASDEV SKLMCHALLG LDVVDW

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MADVFRRLPL LPLVVLLLLL LVVFHVCILD GLPRRGRRRR CVKNNDRMEG RKAISGSAGE  60
RGGRWSVHSP SNSPRPSERS GHAHLPPHLQ PLPDTDNEEG DDRWSRTVPL GSGSTQEWTA  120
IELFGSRDSG KGQSYTELLQ QGLSDTDGDG GMNLSFGLGS GRSAAFSRTV VVNPHPDDDG  180
GDVTVVQRSP RSPAPLREAL GNNKDPPRQQ FRSPSVCGGA SARPQWMQSP SHLSAGSSAG  240
HRLGECRETA PVVADVGDAR DGREVWAEQR QLMRVWAEQR QLMRSVREES ITRGVQRLRV  300
GEDRHDGEEA VGDAHDPDWN DNGAEGGEDD ASYISPSKQA AAMGGRGGKT KSCAGNGRRG  360
KRTAGRGSDA EGDVDGEGGR HFWSVDDIIA LIQAKRDQDA HLQGMGHAYA RMKPRKWKWL  420
DVATRLKKVG VDKEADRCGK KWDNLMQQFK KVNHFQGLSG KQNFFQLSGK DRMSKGFNFN  480
MDRAVYDEIL GSTAKNHTIN PKNVADTGAQ GGVRLPSASS ADPESVGDGD GGAEHDDDDD  540
GSTKGSSQTT GGAGGFGKRK STRQQTFEAM TECMEKHGAL MASTMESNSK RHCSIAIRQC  600
EALEAEIEVQ KKHYAASDEV SKLMCHALLG LDVVDW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-08	Trihelix family protein