PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70465.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 296aa    MW: 32302 Da    PI: 9.147
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix323.1e-1041116270
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ + + aLi a+r+ + + +       r k ++ +W +v++++++ g+ r + +  +kw+nl +++kk+ + ++ 
  GBG70465.1  41 WSVDDIIALIGAKRDQDAHRQgmghayaRIKPQEWKWLDVAQRLKKVGVDRDADKYGKKWDNLMQQFKKVHQFQGL 116
                 999***********666665532222215579999999*******************************9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGGRGGKTKA SARNGRRGKK AAGKRSDAEG DGDVEGGCHF WSVDDIIALI GAKRDQDAHR  60
QGMGHAYARI KPQEWKWLDV AQRLKKVGVD RDADKYGKKW DNLMQQFKKV HQFQGLSGKQ  120
DFFQFSGKER TSKGFNFNMD RAVYDEIVGS TAKNHTINPK NVANTGASGG VRLSSASSAD  180
PESVGDGDDG AGHDDNDDGS TNGSSQMTGS PDGFGKSKST RQQTFEAMTK CMKKHGALMA  240
STMESASKWQ CSIQVRQCEA LEAEVEVQKK HYAALDEVSK LMCHALLEIA KAIREY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-10Trihelix family protein