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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | GBG70203.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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| Family | ZF-HD | ||||||||
| Protein Properties | Length: 593aa MW: 62777.6 Da PI: 5.2178 | ||||||||
| Description | ZF-HD family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | ZF-HD_dimer | 83.6 | 2.3e-26 | 275 | 329 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
++v+Y eC++N Aas+Gg +vDGCgEfmp+ e+ a al+CaAC+CHR+FHRr ve
GBG70203.1 275 HQVHYLECQRNLAASVGGSSVDGCGEFMPA--GESGAGALRCAACDCHRSFHRRVVE 329
689**************************9..45679*****************987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 593 aa Download sequence |
MLAGYGSSRP QVMNEEHREC RHREGGCDSS LLRTSSSSSS SSSRSSGGSS SSSSSSSSGY 60 LESGQFLPVH FVQAAVVNTC ACRLAADLTE AKEKEARRRR RRRRRRAKPT KTATIASASI 120 GRRAQELQQQ QQLEQQRRVY EEDTDDEETE DEEETEDEEI EEQEEKGEEE GGGEEEGGGE 180 EEEEEKVVQE EVEGREEEGW PGPPSYRALQ PQQRKVSAMA DSMVMGGGGV MVGCGATAAV 240 GGMMTVVGSS TPGPQGHPAT FAPSTPRMTS SSFHHQVHYL ECQRNLAASV GGSSVDGCGE 300 FMPAGESGAG ALRCAACDCH RSFHRRVVER DDGLTASMAS IDRAARELLC MANTSYTLLQ 360 GDGGKSVGGA PSASPLALGG GGSAKQQGGG GGGGGGDGGS GCVSVLTTTT TTTATTTPPT 420 PSPSCSSPPC GGDFQAAGDL TTLARLSLQA LEHSAKIITA TAESLSLFQR QNLNRHVAIA 480 GTQPGSSSPL FLLYDGTAGG RIEHAVAGLA IMVVVMNFKI SVGRGEQVNE GALVQLLINF 540 LNFLNFLNFL NFLNFLNFLN FLNFLIGSNS RFSPSLKFLF AYITFFRKLG RRS |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 92 | 101 | KEKEARRRRR |
| 2 | 97 | 102 | RRRRRR |
| 3 | 97 | 103 | RRRRRRR |
| 4 | 97 | 104 | RRRRRRRR |
| 5 | 97 | 105 | RRRRRRRRR |
| 6 | 97 | 106 | RRRRRRRRRR |
| 7 | 98 | 103 | RRRRRR |
| 8 | 98 | 104 | RRRRRRR |
| 9 | 98 | 105 | RRRRRRRR |
| 10 | 98 | 106 | RRRRRRRRR |
| 11 | 98 | 107 | RRRRRRRRRR |
| 12 | 99 | 104 | RRRRRR |
| 13 | 99 | 105 | RRRRRRR |
| 14 | 99 | 106 | RRRRRRRR |
| 15 | 99 | 107 | RRRRRRRRR |
| 16 | 100 | 105 | RRRRRR |
| 17 | 100 | 106 | RRRRRRR |
| 18 | 100 | 107 | RRRRRRRR |
| 19 | 100 | 108 | RRRRRRRRR |
| 20 | 101 | 106 | RRRRRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G75240.1 | 2e-18 | ZF-HD family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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