PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69209.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1094aa MW: 119564 Da PI: 8.2825

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.3	1.2e-10	311	384	2	68
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e +L++ +r ++++++r + k+ +We+++k+m+ g + ++ C +kw+n+ + ykki++ + GBG69209.1 311 WSPEEQIQLVRCKReqemhlaGLDHNYGRMRTKEWKWEDIAKRMANAGRPKDANDCMKKWDNIFQNYKKIQRFQ 384 9999999999999955555555556666889**************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 1094 aa Download sequence
MAGMQVHAVP PAAEGGRRPP TTEPSRRYDP SMYNHLSSWE TPLPPSDEEP EGDELPTFPL 60 ASGSTQLLSQ TVLAGGSASN GRGEYTTLLQ QGLEDDDDGG VDLRFGLSSG GGREASHTFI 120 IDVDPSPRYI QQSGSRHTEQ STLCGGTSVC VGVKPSSAGR QHGSSAPSAD RLTSTCPERN 180 GVAVGSLRIG GTLHSMPKST TSTQPDLRDD GKCRPAVRPT PSVENITRGV SNMRAHSDGG 240 NDDGGGGDDA DGRFGEDVEA GDDDDDIPIR PMGKTGRRGR GRSRGAVRGR SAGRGGRGGA 300 NDDGGKSATY WSPEEQIQLV RCKREQEMHL AGLDHNYGRM RTKEWKWEDI AKRMANAGRP 360 KDANDCMKKW DNIFQNYKKI QRFQNASGGP DFFRLSNEER KEHNFKFRME RALYNEIHIG 420 MVGNHTIFPP NIADTGSPDG VHLPRRGAGA GESVGSEGAG EGLPKERSTK RDSDNNAASG 480 AGGGKRKNAR QQALESIADV MDRHGELMSS TIESSSKRQC SIFTRQCDIL EQEVAVQKAH 540 YAASDETQRM MCHALMEIAA AIRGRSATRT LSSSSRGGLI SCVAGVFIVV TSSSCGGQIS 600 CVPRARRRLR PAEERSTASR GYPSSSRLPP AEDRSSACHV HIVVVTPQPH GRPFSRETYF 660 SPGRPHFPLV RSHCQARLQR SPRNMSTRGN TRGKKRNVVV DDSQEQGRGR RQAPKAKRVR 720 TGDALPRVRG RGAQGWAGEA EGACEDEFTA EEEQAKATTS EVRESDRQCS SDRTASKRMQ 780 TPPHEAQLLR GRETRTEKAP VVDLGGDDDE PLERRRIRIR TTTTPPRRWS CGLLQTKGQS 840 RAGCPPRRPT WWRGGSRGRR ACSWRPGGRC RGGGCFRQCG RRSDWEEGRS SCGDGERGGA 900 WQEESQAGDL SMDLPLWFAG ANIEDKPEDD DMAAHQDSTV IRVSYAFRAV VQMGALVDGE 960 FISHDRLSRV ADCFRLLLAA CMWIMRMAGD DPHSHYEAFY FADLVVKPTL VAAMHHSFDH 1020 RRSVVRVAKV VTDRLGKATA TFGQYPNYIP QWVPCDIAFR HDASITGPED ANKLDWLGSG 1080 PPDDDNNDDG KDDA

Sequence ? help Back to Top

Protein Sequence Length: 1094 aa Download sequence

MAGMQVHAVP PAAEGGRRPP TTEPSRRYDP SMYNHLSSWE TPLPPSDEEP EGDELPTFPL  60
ASGSTQLLSQ TVLAGGSASN GRGEYTTLLQ QGLEDDDDGG VDLRFGLSSG GGREASHTFI  120
IDVDPSPRYI QQSGSRHTEQ STLCGGTSVC VGVKPSSAGR QHGSSAPSAD RLTSTCPERN  180
GVAVGSLRIG GTLHSMPKST TSTQPDLRDD GKCRPAVRPT PSVENITRGV SNMRAHSDGG  240
NDDGGGGDDA DGRFGEDVEA GDDDDDIPIR PMGKTGRRGR GRSRGAVRGR SAGRGGRGGA  300
NDDGGKSATY WSPEEQIQLV RCKREQEMHL AGLDHNYGRM RTKEWKWEDI AKRMANAGRP  360
KDANDCMKKW DNIFQNYKKI QRFQNASGGP DFFRLSNEER KEHNFKFRME RALYNEIHIG  420
MVGNHTIFPP NIADTGSPDG VHLPRRGAGA GESVGSEGAG EGLPKERSTK RDSDNNAASG  480
AGGGKRKNAR QQALESIADV MDRHGELMSS TIESSSKRQC SIFTRQCDIL EQEVAVQKAH  540
YAASDETQRM MCHALMEIAA AIRGRSATRT LSSSSRGGLI SCVAGVFIVV TSSSCGGQIS  600
CVPRARRRLR PAEERSTASR GYPSSSRLPP AEDRSSACHV HIVVVTPQPH GRPFSRETYF  660
SPGRPHFPLV RSHCQARLQR SPRNMSTRGN TRGKKRNVVV DDSQEQGRGR RQAPKAKRVR  720
TGDALPRVRG RGAQGWAGEA EGACEDEFTA EEEQAKATTS EVRESDRQCS SDRTASKRMQ  780
TPPHEAQLLR GRETRTEKAP VVDLGGDDDE PLERRRIRIR TTTTPPRRWS CGLLQTKGQS  840
RAGCPPRRPT WWRGGSRGRR ACSWRPGGRC RGGGCFRQCG RRSDWEEGRS SCGDGERGGA  900
WQEESQAGDL SMDLPLWFAG ANIEDKPEDD DMAAHQDSTV IRVSYAFRAV VQMGALVDGE  960
FISHDRLSRV ADCFRLLLAA CMWIMRMAGD DPHSHYEAFY FADLVVKPTL VAAMHHSFDH  1020
RRSVVRVAKV VTDRLGKATA TFGQYPNYIP QWVPCDIAFR HDASITGPED ANKLDWLGSG  1080
PPDDDNNDDG KDDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	867	874	GGRCRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-06	Trihelix family protein