PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67891.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB

Protein Properties

Length: 817aa MW: 88910.2 Da PI: 8.0269

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	8.9e-09	592	632	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 +WT+eE +ll+++ k++++g +W+ I +++g gR+ +++ GBG67891.1 592 PSWTKEEMDLLAKGLKKFPKGtarRWEVIGNYLG-GRSVEEV 632 68******************************.*9876 PP
2	Myb_DNA-binding	25.6	2.8e-08	754	799	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT d lv+a k ++++ +W++Ia+ ++ gR+ qc r+ GBG67891.1 754 TWTDAQDVALVKALKAFPKDtpqRWDRIAQAVP-GRSKSQCFKRFSE 799 7******************************.*****999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MEVKLLTYVE DDVPPEGYVV LSSPAEPLKW HRAEPAGFSF HQAALRRSGM LKHSDGDAQD 60 EEDEKAASAS AAGSASMADG SSQWYSGKGK KSSSAKDGSG GQDHYKLLGL GHLRFLATED 120 QIKKAYREVA LKFHPDKQAS LLLEQTSQSA RDSKRQEIDD HFKSIQEAYE VLIDPVKRRI 180 FDSCDEFDDE IPSDCSADDF FKVFGPVFLR NGRWSVTQPC PQLGEDETSM EEVDKFYSFW 240 FNFRSWREHP HADEFDLEQA ESREHKRWME RQNAKLREKA KKEEMGRIRT MVDNAYRRDP 300 RVIRQKEAEK AEKVRRKQAK IQAKKEKEEE IARKEEEERL RREEEERALA EQAAQMKKQK 360 DKEKKLLRKE KARLRAIAAP LYTTTPSTST STSSSSSSTA ASTPSTTTTT SATSSPRRPL 420 SSPSSSSSSK AAAQDPSRGG RGDGSRAGGR NSTAGGQQNS QQKQQQQQQQ LRPKMAVAIS 480 EEDVEKLCSC LDLNQMKDLC GRLEAETREE RRVEMVVEAL TDVERQQQAT AAACSQGDGL 540 AAAAAGTGGH QANGGANHHI AADGIPSSGG GGGGGEGTAA GGGGGGGGSD KPSWTKEEMD 600 LLAKGLKKFP KGTARRWEVI GNYLGGRSVE EVLKMMKELA AAKPDDSRSF EHFLQKRKPS 660 NRVIGNTPDI ADGRVAEDME GAGGRRRDED GRGGGGGGGG NSAATRGGVG EDEKGNASGR 720 RGAATDGAAG GARTGASTVS ESLATAARAP AEDTWTDAQD VALVKALKAF PKDTPQRWDR 780 IAQAVPGRSK SQCFKRFSEL RENFRRKRNE GGAADDS

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MEVKLLTYVE DDVPPEGYVV LSSPAEPLKW HRAEPAGFSF HQAALRRSGM LKHSDGDAQD  60
EEDEKAASAS AAGSASMADG SSQWYSGKGK KSSSAKDGSG GQDHYKLLGL GHLRFLATED  120
QIKKAYREVA LKFHPDKQAS LLLEQTSQSA RDSKRQEIDD HFKSIQEAYE VLIDPVKRRI  180
FDSCDEFDDE IPSDCSADDF FKVFGPVFLR NGRWSVTQPC PQLGEDETSM EEVDKFYSFW  240
FNFRSWREHP HADEFDLEQA ESREHKRWME RQNAKLREKA KKEEMGRIRT MVDNAYRRDP  300
RVIRQKEAEK AEKVRRKQAK IQAKKEKEEE IARKEEEERL RREEEERALA EQAAQMKKQK  360
DKEKKLLRKE KARLRAIAAP LYTTTPSTST STSSSSSSTA ASTPSTTTTT SATSSPRRPL  420
SSPSSSSSSK AAAQDPSRGG RGDGSRAGGR NSTAGGQQNS QQKQQQQQQQ LRPKMAVAIS  480
EEDVEKLCSC LDLNQMKDLC GRLEAETREE RRVEMVVEAL TDVERQQQAT AAACSQGDGL  540
AAAAAGTGGH QANGGANHHI AADGIPSSGG GGGGGEGTAA GGGGGGGGSD KPSWTKEEMD  600
LLAKGLKKFP KGTARRWEVI GNYLGGRSVE EVLKMMKELA AAKPDDSRSF EHFLQKRKPS  660
NRVIGNTPDI ADGRVAEDME GAGGRRRDED GRGGGGGGGG NSAATRGGVG EDEKGNASGR  720
RGAATDGAAG GARTGASTVS ESLATAARAP AEDTWTDAQD VALVKALKAF PKDTPQRWDR  780
IAQAVPGRSK SQCFKRFSEL RENFRRKRNE GGAADDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	312	318	EKVRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	2e-85	MYB family protein