PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG67782.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 492aa    MW: 52574.9 Da    PI: 7.0606
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG67782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.63.7e-14238314170
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 rW + e+  L ++r+e+ + ++++        lk++ W+ v ++mre+g++r  +qCk+k++ +  +y+++k++ek+
  GBG67782.1 238 RWGDTETDWLCRFRNEVRTLMGEDTevygrarLKAGFWKIVEQRMREKGYNRRDEQCKNKFNPIMEYYRRLKAHEKS 314
                 8**************88888887533444444******************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MWKVTDGVGG SLQPTNAVPG GAPLSSPVTP VRGFRIGLGG EDENTLRQRL RQRAMRVADG  60
LPVDLDGGVL AGSDAPAPRP EAVHHASPAA SGAFSRGGAT VSGQRSPAGS GTTHGHRGDG  120
SLQHMQEDAG DTALPCNEQT TQSYYMLNHL IRDNERSASP VQPVHNNDVG ANGLGAQETP  180
QQQTPPSCGR SSGARTDTPS PVPSGLQSGA GTTASQSGGG ASTPPAPGSS SPPPNTKRWG  240
DTETDWLCRF RNEVRTLMGE DTEVYGRARL KAGFWKIVEQ RMREKGYNRR DEQCKNKFNP  300
IMEYYRRLKA HEKSWYDIID PGEKDKDSID LSNLMDSGAD EERFEDEDDA ADHGSGAGGA  360
SGDPPAGVGG STSGSQGAGI EPTLGKRKRG YVSARESSVQ SVTIAMRAHT VALTRSDKEC  420
TVMRIEAMRA IATQQVEARR ELVLQEIASR ERIADRMGER VERGYSALVD VIRSLRSRRG  480
SSRESPSSSD SR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.13e-07Trihelix family protein