PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67712.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

ERF

Protein Properties

Length: 1024aa MW: 106745 Da PI: 4.9045

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63	6.6e-20	255	304	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdps r r +lg+++taeeAa+a+++a+++++g GBG67712.1 255 RFRGVRQRP-WGKWAAEIRDPS----RgVRLWLGTYDTAEEAARAYDNAARSIRG 304 69*****.******84....36**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MPGAQLLPRK LNEQQQQPRV VSNARIAGHD GVVGVLPSAR EADVLLTKAK LRICAKRGRV 60 GGGGGYVDPD ATDTSSDDDD VAGSLRFAGL EYPGSRRLGR VAGGGGLSTE DNLSSSSEDE 120 EELGLGLFRA GGGGGACRFL VGGGRSGTGI GGLHVNPAWC RAAAGAMVAG GKEGGGGAGV 180 LDAIGGGGGS CAGAPKPGKN GRKRAASVVA GAGGVLVNKS LKMAKGGGAL SPGRAPAVAR 240 GAGGAASAVD GVVHRFRGVR QRPWGKWAAE IRDPSRGVRL WLGTYDTAEE AARAYDNAAR 300 SIRGRGAMTN FPLPGDLELP VLYSKYSSSN QNQQQQQQQQ QQQQATLYKK QSQKQRRRKR 360 GCGGGTEGKK QQEEGDGEGE GEGEEDEEDE DDEDDDYGGV QGLAEGSGGG RHRNRGSLRG 420 SHRKQPDEKE RTSTANYSTT TSLSSRLHHR QQSASQAQRP LPSLSGSRSP SSLKQQPQPL 480 NTTGQQQQQQ QQRELNGRRE ESSKPGGDVL ELVGRAREAA EMPTAAISVA PKDKRHRPRH 540 HYHHDHHDDD RDHHHQHEQE ETTGGVDPSN HRKDDSGMTV SSVAGPPVSC DSCADNGGVG 600 GGAAGSCCSD ERTTGPQSSS CETTGKAGSS FGGSSAMEST SMFPMKRKKN KKKRVGGLRE 660 GGAEVGNEEE GEEKRRIDGC ECGSGSADEM TMTHTRSAVC TSSCRVEDDR LSLLRPQAQD 720 DDDDDEDDED DEDEQEDRGG GSRWRCTGGQ AHGPGSSSCR IEGEGDGTEE ALFLGRRRLL 780 GSQSSSVFRH LELQQTHAER VPDESSLLQS QLHDCCRSME EVEMVSPCVG GRGGGGGGGG 840 GAGEYGLSAS QCEQRGAGGA TGADDEGEEE AGILGARATA VGTTVLGSLG EVYDDDDVAN 900 RDRRLECCMG MVVDNDCVSS TCVSAMDAEP IAMFMEEFSA GTSSEFLLDM STSSLDVMSS 960 PLLLSSLPLY DLGIPDIDDD FSPPAVCVGE GGVGGLIGGL WGMTELAGVG AAMGGGDAGG 1020 CFAV

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MPGAQLLPRK LNEQQQQPRV VSNARIAGHD GVVGVLPSAR EADVLLTKAK LRICAKRGRV  60
GGGGGYVDPD ATDTSSDDDD VAGSLRFAGL EYPGSRRLGR VAGGGGLSTE DNLSSSSEDE  120
EELGLGLFRA GGGGGACRFL VGGGRSGTGI GGLHVNPAWC RAAAGAMVAG GKEGGGGAGV  180
LDAIGGGGGS CAGAPKPGKN GRKRAASVVA GAGGVLVNKS LKMAKGGGAL SPGRAPAVAR  240
GAGGAASAVD GVVHRFRGVR QRPWGKWAAE IRDPSRGVRL WLGTYDTAEE AARAYDNAAR  300
SIRGRGAMTN FPLPGDLELP VLYSKYSSSN QNQQQQQQQQ QQQQATLYKK QSQKQRRRKR  360
GCGGGTEGKK QQEEGDGEGE GEGEEDEEDE DDEDDDYGGV QGLAEGSGGG RHRNRGSLRG  420
SHRKQPDEKE RTSTANYSTT TSLSSRLHHR QQSASQAQRP LPSLSGSRSP SSLKQQPQPL  480
NTTGQQQQQQ QQRELNGRRE ESSKPGGDVL ELVGRAREAA EMPTAAISVA PKDKRHRPRH  540
HYHHDHHDDD RDHHHQHEQE ETTGGVDPSN HRKDDSGMTV SSVAGPPVSC DSCADNGGVG  600
GGAAGSCCSD ERTTGPQSSS CETTGKAGSS FGGSSAMEST SMFPMKRKKN KKKRVGGLRE  660
GGAEVGNEEE GEEKRRIDGC ECGSGSADEM TMTHTRSAVC TSSCRVEDDR LSLLRPQAQD  720
DDDDDEDDED DEDEQEDRGG GSRWRCTGGQ AHGPGSSSCR IEGEGDGTEE ALFLGRRRLL  780
GSQSSSVFRH LELQQTHAER VPDESSLLQS QLHDCCRSME EVEMVSPCVG GRGGGGGGGG  840
GAGEYGLSAS QCEQRGAGGA TGADDEGEEE AGILGARATA VGTTVLGSLG EVYDDDDVAN  900
RDRRLECCMG MVVDNDCVSS TCVSAMDAEP IAMFMEEFSA GTSSEFLLDM STSSLDVMSS  960
PLLLSSLPLY DLGIPDIDDD FSPPAVCVGE GGVGGLIGGL WGMTELAGVG AAMGGGDAGG  1020
CFAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	177	GGKEGGGG
2	349	360	KKQSQKQRRRKR
3	830	837	GGKEGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47520.1	8e-19	ERF family protein