PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67063.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 956aa MW: 102498 Da PI: 5.8819

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.2	7.9e-12	701	774	2	68
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ + + aLi+a+r+ + ++ r k ++ +W +v++++++ g+ r + +C +kw+nl +++kk+ + + GBG67063.1 701 WSVDDIIALIRAKRDQDAHMPgishayaRMKPREWKWLDVAQRLKKVGVDRDADRCGKKWDNLMQQFKKVHRFQ 774 99**********777777644433336789999********************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 956 aa Download sequence
MRVLAAVGAA GSSTAQTGGE PVTGMESGYH DIGDRRGERM LEAGPSEGGP SPAFDITSTT 60 LLQDFRVVLT TTDSACSPSG TNSCLSWVKS VVFTSQRGVF FYLREDRSLN TSASARRDSV 120 KFVRKGDLRG IASSGDAEGN SSLLTLSWTS EKRNGTAASA AAWNSGTVRS EDGLAYSTGF 180 DLSRNERNLV MPTRWGLAFI NTTDGSGTTY LYLIPDFQCR FAAFNPNRTI LYVARDQCLK 240 FSVTDGESPE SFVNDFRTRA CRDASYLTLG HRSFLQDGSY LYARDDLNHK IVGFNLINGS 300 VDSVTGTYEA GQRNSLYVGA NTWEANLALT QDGCNLFFAA DWATNIRRVA FDKPGGKVVM 360 EETVAKCGLP GECVIGTVAL DNDDSHLYVS IQTGQLFEFP INKQALGQCS GAFPTPAAVL 420 TGTLPTESAP SPSSSEPSTE SAPSPSSSEP STESSSSSAA SSSSSSSSSS SSTASASSSS 480 SPDSPPPGQS TDASPATGSS STPGHNGSST RVSSSLPDRS PAPLWEATGN NRDPPTQQFR 540 SPSMPRAASV RPQWMQSSSP LSGGSTAGRR HAECGETDRG IVDLGNARDG REVWAEQRRL 600 LRSGREESIT RGVQRLRVGD HENDSEEPVL DADDHKWNDN DGEGEEEEAG YVSSSNQAVS 660 MGGRGGKTKA SARNARRGKK AAAKGSDAEG DIDAEGGRQF WSVDDIIALI RAKRDQDAHM 720 PGISHAYARM KPREWKWLDV AQRLKKVGVD RDADRCGKKW DNLMQQFKKV HRFQGMSGKQ 780 DFFQLSGKER TSKGFNFNMD RAVYDEILGS TAKNHTINPK NVADTGALSG VRLSSASSGD 840 PESVGDRGGG AGQDGDDDGL TKGSSQMTGG PGGFGKREST RQQTFEAMTD CMDKHGSLMT 900 STMESNNKRL CSIAIRQCEA FEAEVELQKR RYASSDEVSR LMCNALMEIA KAIRER

Sequence ? help Back to Top

Protein Sequence Length: 956 aa Download sequence

MRVLAAVGAA GSSTAQTGGE PVTGMESGYH DIGDRRGERM LEAGPSEGGP SPAFDITSTT  60
LLQDFRVVLT TTDSACSPSG TNSCLSWVKS VVFTSQRGVF FYLREDRSLN TSASARRDSV  120
KFVRKGDLRG IASSGDAEGN SSLLTLSWTS EKRNGTAASA AAWNSGTVRS EDGLAYSTGF  180
DLSRNERNLV MPTRWGLAFI NTTDGSGTTY LYLIPDFQCR FAAFNPNRTI LYVARDQCLK  240
FSVTDGESPE SFVNDFRTRA CRDASYLTLG HRSFLQDGSY LYARDDLNHK IVGFNLINGS  300
VDSVTGTYEA GQRNSLYVGA NTWEANLALT QDGCNLFFAA DWATNIRRVA FDKPGGKVVM  360
EETVAKCGLP GECVIGTVAL DNDDSHLYVS IQTGQLFEFP INKQALGQCS GAFPTPAAVL  420
TGTLPTESAP SPSSSEPSTE SAPSPSSSEP STESSSSSAA SSSSSSSSSS SSTASASSSS  480
SPDSPPPGQS TDASPATGSS STPGHNGSST RVSSSLPDRS PAPLWEATGN NRDPPTQQFR  540
SPSMPRAASV RPQWMQSSSP LSGGSTAGRR HAECGETDRG IVDLGNARDG REVWAEQRRL  600
LRSGREESIT RGVQRLRVGD HENDSEEPVL DADDHKWNDN DGEGEEEEAG YVSSSNQAVS  660
MGGRGGKTKA SARNARRGKK AAAKGSDAEG DIDAEGGRQF WSVDDIIALI RAKRDQDAHM  720
PGISHAYARM KPREWKWLDV AQRLKKVGVD RDADRCGKKW DNLMQQFKKV HRFQGMSGKQ  780
DFFQLSGKER TSKGFNFNMD RAVYDEILGS TAKNHTINPK NVADTGALSG VRLSSASSGD  840
PESVGDRGGG AGQDGDDDGL TKGSSQMTGG PGGFGKREST RQQTFEAMTD CMDKHGSLMT  900
STMESNNKRL CSIAIRQCEA FEAEVELQKR RYASSDEVSR LMCNALMEIA KAIRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-09	Trihelix family protein