PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66648.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB

Protein Properties

Length: 760aa MW: 82241.6 Da PI: 7.4345

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G+ +W +I ++mg + R +k+c+ rw +yl GBG66648.1 4 RLRWQPEEDNLLRLYVKQYGPQDWGLIQERMGkpLARDAKSCQQRWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	28.9	2.7e-09	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ + +E ++ + + +++G++ Wk+Ia++++ gRt+ + +w y GBG66648.1 59 KGPLSDDEKQRVIVLQAKYGNK-WKKIAAEVP-GRTARRLNKWWDVY 103 68889***************.*****.**9888888665 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MKERLRWQPE EDNLLRLYVK QYGPQDWGLI QERMGKPLAR DAKSCQQRWK NYLRPGLKKG 60 PLSDDEKQRV IVLQAKYGNK WKKIAAEVPG RTARRLNKWW DVYMAQLEAK QQQANAAKVS 120 QAFDQPYHSS ILSRYAEKRG CNWEHLPLST PPTSSSLPHN PYLMALSSNG VLVPSCFLAS 180 SFSRPRSEVC NAEQLSSTAP AVLQFSTPQT SGDKSSTNAA LRDDQCPNQR TELLPLMSSS 240 PGADSSSHGG TGAVPCHLSV SPPTSEPDSV RSAVNPRAGV ITPGPSSLPS WIPSISSPAK 300 GTEGDGADLQ QPAPTAGRDR NRLPAVVDAQ DRGCLETHYP APSTPVSSPA SPIPAWMSSS 360 GASSSTSTAP GPTLPLTLSL ASPQTPSSRA PPASRCQYAS SFQPLAKPLD QGSDQERGHG 420 EGQDNQNQGQ DQSPSTQTAN SKSLGGGGSC SPASKEGGST STPDMANGDH RLSANRLRHD 480 DCHEHSHRHN LQQLQHQVGS LLPQHEHHQT GTSQLTSPPS NSATLGALFC GPPCIPCPNG 540 IGIGIQLGSS AGVRLPAAGA CMPGTPQCWH GAGVKPGEGS NAETFMNPEA TSQICHGLVQ 600 DLGRIKEELF NHKKEMEWKL KRLEQQFESE KIQKKKQRLE QVEAQIRALR DEANRYFEEV 660 DKRYHQEFMD LKREDERKEM QLLERWDLKH REIVWFSGQQ LPAAGQRSSL ESSEHIAAND 720 VEGGACEASA LRVAGMQGAP GMGGPEGGDA GITAFHDCTS

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MKERLRWQPE EDNLLRLYVK QYGPQDWGLI QERMGKPLAR DAKSCQQRWK NYLRPGLKKG  60
PLSDDEKQRV IVLQAKYGNK WKKIAAEVPG RTARRLNKWW DVYMAQLEAK QQQANAAKVS  120
QAFDQPYHSS ILSRYAEKRG CNWEHLPLST PPTSSSLPHN PYLMALSSNG VLVPSCFLAS  180
SFSRPRSEVC NAEQLSSTAP AVLQFSTPQT SGDKSSTNAA LRDDQCPNQR TELLPLMSSS  240
PGADSSSHGG TGAVPCHLSV SPPTSEPDSV RSAVNPRAGV ITPGPSSLPS WIPSISSPAK  300
GTEGDGADLQ QPAPTAGRDR NRLPAVVDAQ DRGCLETHYP APSTPVSSPA SPIPAWMSSS  360
GASSSTSTAP GPTLPLTLSL ASPQTPSSRA PPASRCQYAS SFQPLAKPLD QGSDQERGHG  420
EGQDNQNQGQ DQSPSTQTAN SKSLGGGGSC SPASKEGGST STPDMANGDH RLSANRLRHD  480
DCHEHSHRHN LQQLQHQVGS LLPQHEHHQT GTSQLTSPPS NSATLGALFC GPPCIPCPNG  540
IGIGIQLGSS AGVRLPAAGA CMPGTPQCWH GAGVKPGEGS NAETFMNPEA TSQICHGLVQ  600
DLGRIKEELF NHKKEMEWKL KRLEQQFESE KIQKKKQRLE QVEAQIRALR DEANRYFEEV  660
DKRYHQEFMD LKREDERKEM QLLERWDLKH REIVWFSGQQ LPAAGQRSSL ESSEHIAAND  720
VEGGACEASA LRVAGMQGAP GMGGPEGGDA GITAFHDCTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	7e-48	MYB family protein