PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG65611.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 515aa MW: 56185.4 Da PI: 7.3903

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG65611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42	2.4e-13	235	310	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 rW + e+ L ++r+e++e ++++ lk++ W+ v ++mr++g++r +qCk+k++++ +y++++++e+ GBG65611.1 235 RWGETETEWLCRFRNEVKELMGQETkaygrarLKAGFWKIVEERMRAKGYNRDHEQCKNKFNQILDYYRRLRAHEG 310 8************99999986422344444**************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MVTDCVTDAP HSDVVTHGPI LLSPVTPVLK FRIGVCGEDE HSLRQRLRMR AMAMAKGLTP 60 SMNSDTMPSQ QHESGSAATI SPITQTTHRV SPESSCDGAV MQQQCPPAAS SEYVLNRIIR 120 DIEAGVRTPE SDYVNVGGEA VSLHTSPSHT PSPLHTPGSV PAATLSPVVR ESGTHDTAPR 180 SGSSPSPPAA IPSPINGNVS SHTPPSVSVP SGTRAGGPSR SLRRRPSSGE KSTDRWGETE 240 TEWLCRFRNE VKELMGQETK AYGRARLKAG FWKIVEERMR AKGYNRDHEQ CKNKFNQILD 300 YYRRLRAHEG WSGLPSYWDM NQTRRKKYNV DFVLRRSWYD IIHPVEKDKD SINLTNLMDS 360 GADDERVENG EGVSDRDGAM EGGSEDNGSG YGGSPGGSQS TGFEPALGKR KRGAANARES 420 SVQAVTAAMR AHTTALTRSD MECAKMRCQA TRDIAKQQAD ANRELLQQDI ASRERIATIM 480 GDKVENGYYV LADAIRSLCP PTHSPSTDPE SGDDR

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MVTDCVTDAP HSDVVTHGPI LLSPVTPVLK FRIGVCGEDE HSLRQRLRMR AMAMAKGLTP  60
SMNSDTMPSQ QHESGSAATI SPITQTTHRV SPESSCDGAV MQQQCPPAAS SEYVLNRIIR  120
DIEAGVRTPE SDYVNVGGEA VSLHTSPSHT PSPLHTPGSV PAATLSPVVR ESGTHDTAPR  180
SGSSPSPPAA IPSPINGNVS SHTPPSVSVP SGTRAGGPSR SLRRRPSSGE KSTDRWGETE  240
TEWLCRFRNE VKELMGQETK AYGRARLKAG FWKIVEERMR AKGYNRDHEQ CKNKFNQILD  300
YYRRLRAHEG WSGLPSYWDM NQTRRKKYNV DFVLRRSWYD IIHPVEKDKD SINLTNLMDS  360
GADDERVENG EGVSDRDGAM EGGSEDNGSG YGGSPGGSQS TGFEPALGKR KRGAANARES  420
SVQAVTAAMR AHTTALTRSD MECAKMRCQA TRDIAKQQAD ANRELLQQDI ASRERIATIM  480
GDKVENGYYV LADAIRSLCP PTHSPSTDPE SGDDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	4e-07	Trihelix family protein