PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG64294.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 280aa    MW: 30867.6 Da    PI: 10.5353
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG64294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix41.24.4e-1341116270
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ +++laLi+a+r+ + +++       r k ++ +W +v++++++ g+   +++C +kw+nl +++kk+ + ++ 
  GBG64294.1  41 WSVDHILALIRAKRDQDAHMQgmgyayaRIKPREWKWLDVAQRLKKVGVDGDANKCGKKWDNLMQQFKKVHQFNGL 116
                 **************9999999444333334799999**********************************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGGRGWKTKT SARNGRRGKK VAGKGSDADG DGDAEGGRHF WSVDHILALI RAKRDQDAHM  60
QGMGYAYARI KPREWKWLDV AQRLKKVGVD GDANKCGKKW DNLMQQFKKV HQFNGLPGKQ  120
DFFQLLAKER MSKGFNFNMD RAVYDEILGS TAKNHNIHPK NVADTCASGG VRLPYASSAD  180
PKSVGDGDAS APHDDDDNGS TKGSSQTTGN PDGFGKRTST RQQTFEAMTE CMEKHGALMA  240
STMESASKCS APSKSNSARR WKRRSKCKKS TTQRWMKSAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263269RRSKCKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-09Trihelix family protein