PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG62764.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family MYB
Protein Properties Length: 593aa    MW: 63834.6 Da    PI: 10.5856
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG62764.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.5e-11219262247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+e+d +l ++v + G + Wk++a ++  gR + +c+ rw  +
       GBG62764.1 219 MAWTPEDDTKLQQVVGEVGEN-WKKVAVRIH-GRKRSECRARWMHL 262
                      68*****************88.*********.***********977 PP
2Myb_DNA-binding44.43.9e-14274316246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++WT+eEd  +v+  k++G++ W++ a++++ gRt+k +ksrw++
       GBG62764.1 274 KAWTEEEDAAIVRMYKEFGKK-WTRMAKELP-GRTRKTVKSRWLT 316
                      58*******************.*********.***********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MARTRKRKAP GDCERFMMSQ MYSLQRYLAG YWLAPGFDLS PEQFYQAALS IILPPAKRVA  60
RAPAPPEAGA PAKVALPPVT KDGKTLPQTA AALPASTTPV VLPEPPKRPN ERGKEKKLVP  120
VPVSAPPAPA KGPAVMPGGR ANAAVTPGKG KGEAARTKPT GSAAASAGKG VVGSAAFLKA  180
GANNEALVVT SGSLAKAGGK EVGEPAAGEG GNATPKAEMA WTPEDDTKLQ QVVGEVGENW  240
KKVAVRIHGR KRSECRARWM HLRSDLCVKR APSKAWTEEE DAAIVRMYKE FGKKWTRMAK  300
ELPGRTRKTV KSRWLTALKH RVEDDGEGGA TGDGSDGDMD MTPSDPHIKQ QVKGGQTSLS  360
QSAKHHQAQK HQQQHQQQEE QSSPNKEQRP GDKKRKKKKK AKGKPKDAVA EDGDVQKPHF  420
SKIDETAAAK EDTRGLGHQT MDSMQAITLA PNRLSVESAG QKVSQDPIRQ DVGPEQAVAS  480
LKEQQAEQKS LPARAFTKKQ VLGNLGSVLQ QQLILKKHLQ QQQQQLLQKQ KEGCGVGGKQ  540
PLTMEHSDSA NVQKMNTAGE EAEQQVQTQA PSASIPEAAN AARKSARTRK IWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1388396QRPGDKKRK
2393397KKRKK
3393399KKRKKKK
4394400KKRKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.12e-18MYB family protein