PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG58808.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 441aa    MW: 48153.5 Da    PI: 3.8531
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG58808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.41.7e-081291702869
    trihelix  28 kplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 + +W+ ++k+m++ g  r +  C +kw+nl + ykki++ ++
  GBG58808.1 129 EWKWDGIAKRMAKAGRPRDADDCMKKWDNLFQNYKKIQRFQN 170
                 669*********************************998665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MVVDVKPHNA DPTRRDGRAR LQITDVRPGP TVENITRGVS NMRAHNNGND DDAGDGDHAN  60
EGFREDADAW DVDDDIHIRP LGKTAGRGKG RSRGVVCGRS VGRSGRGDIS DDGGKSATYR  120
STDDQLLLEW KWDGIAKRMA KAGRPRDADD CMKKWDNLFQ NYKKIQRFQN ASGEADFFRL  180
SNDERKENNF KSWMDRVLYN EIHRGMLGNH TIFLPNVADT GSSDGVQLPR QGAAGGESVG  240
SEAGGDGCPE ERSSARDSDN KVGSGGAGGK RKNARQQALE SIAYVMDHHG ELMSSTIDSS  300
SKRQCSILTR QYDDATCADN DDDATAANAD ADAAAADADA DVADDDDDDD DDDDDDYDGD  360
HDDDDDGDDG GDDDDDDDAD DDDDDDDDDD DDDDDDDDED DDDDDDDDDD DDDDGHREND  420
GEANRHNHDD DDEDDDAVVD P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-07Trihelix family protein