PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60739.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 320aa    MW: 35913.4 Da    PI: 6.5669
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.55.1e-371670761
      zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                +cprC stntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvP+Ggg+rk+++ 
  PHT60739.1 16 ACPRCGSTNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRG 70
                7**************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MERGTIWKPN VELPPACPRC GSTNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPI  60
GGGCRKSRRG KSSSNTIHNH HHHELISRNL GHGVCLNPTN IDHHNQSTSS SLDHHHGPSI  120
DLALVYSNFL NSTNSKSSQP EDRQNPELPD NLLLPDEGVL VTPSFELSSM IDMEFVNSEL  180
GQESRLLGAG VDFYFSGIHE EKQNVMNHSD VHDNHYTNNM NVNANNSINH DHQLGNNNYM  240
ELPPLPSEDI MWSNSHDHHH HHMVFPNDIL STSHNLTTGG SEPEPVPELA VQNPSHDHSA  300
NNANDGSLFN LSNFGNIFRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.18e-34Dof family protein