PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60692.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 291aa MW: 33356.6 Da PI: 9.1987

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.1	1.6e-40	170	246	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l+efD++krsCr+rLa+hn+rrrk+ + PHT60692.1 170 CQAEGCNADLTHAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHVLTEFDNGKRSCRKRLADHNRRRRKNIQ 246 **************************************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MLDYEWENQS TFIFPNDQTN QENEQNNNQF LDPHANFSPM TNYQHHQQQQ QQQLQVQNSQ 60 FPQYQVNPNN NQFNSLYDPR AYGVTYTNNT HETSLLSLQP TGSPTGFMLM PKTEPQFGGG 120 IHDFSSTTTR IGLNLGGRTY FASSSDDDFV NRLYRRTRTV EAGSLNTPKC QAEGCNADLT 180 HAKHYHRRHK VCEFHSKAAT VVAAGLTQRF CQQCSRFHVL TEFDNGKRSC RKRLADHNRR 240 RRKNIQQENN KKQPQTSKSP AESSSGAHSS TVTVAISPPR ISVDCFRQRT Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	4e-70	SBP family protein