PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60561.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 463aa MW: 53290.2 Da PI: 4.3847

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	69.6	8.2e-22	15	142	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.k.kvka.eek.ewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk 95 G+rFhP deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + + + k yfF+k +kk++ g+r r +++ g+Wk +k+v++ PHT60561.1 15 LGMRFHPADEELI-RYLLKFVSCKSYSC-DNIRLEDLYGNkKPWEIFeSnLLGDeDAKnVRYFFTKLKKKKSDGTRFIRtVIRGGFWKGLDCEKSVYD- 110 7**********.9******999.7899999996549633322222223255**************8899***********. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + lvg kk + + ++e W+m ey+l PHT60561.1 111 GLMLVGSKKNYRYQ-YKGYQTEDVVWTMREYSL 142 999****996.455555699*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSEISSNSRK PVVALGMRFH PADEELIRYL LKFVSCKSYS CDNIRLEDLY GNKKPWEIFE 60 SNLLGDEDAK NVRYFFTKLK KKKSDGTRFI RTVIRGGFWK GLDCEKSVYD GLMLVGSKKN 120 YRYQYKGYQT EDVVWTMREY SLDDKILKAL RRRGLIHYED VVLCCVKSKI NVHARDHKEL 180 GTTNFQDSCP VYPLTSSEQN NAFQELQQDQ NSEQLIKQLQ IVDEIVPSAF HDSYQVYPFT 240 SSKHYAFHEL QQNQNSKELN VVQENNIEET TPFSQYHNDD VTSYLEEGTT NIQDCNVDCY 300 TGADFSSTFA DLMMNHMETQ PQLPIYNDES ANDYQLLQQI ITCPMAQEST CVVLNGGITD 360 AAVFVSGQRS TCCEELQQDQ TCERVNIVQE NNIEEAVPFA QYHNDDVTSY SEEEATNFQD 420 YNIDCNVGAN FSSTLADLLN DIGTQPQLPI FIDEYGYDYQ LAQ

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSEISSNSRK PVVALGMRFH PADEELIRYL LKFVSCKSYS CDNIRLEDLY GNKKPWEIFE  60
SNLLGDEDAK NVRYFFTKLK KKKSDGTRFI RTVIRGGFWK GLDCEKSVYD GLMLVGSKKN  120
YRYQYKGYQT EDVVWTMREY SLDDKILKAL RRRGLIHYED VVLCCVKSKI NVHARDHKEL  180
GTTNFQDSCP VYPLTSSEQN NAFQELQQDQ NSEQLIKQLQ IVDEIVPSAF HDSYQVYPFT  240
SSKHYAFHEL QQNQNSKELN VVQENNIEET TPFSQYHNDD VTSYLEEGTT NIQDCNVDCY  300
TGADFSSTFA DLMMNHMETQ PQLPIYNDES ANDYQLLQQI ITCPMAQEST CVVLNGGITD  360
AAVFVSGQRS TCCEELQQDQ TCERVNIVQE NNIEEAVPFA QYHNDDVTSY SEEEATNFQD  420
YNIDCNVGAN FSSTLADLLN DIGTQPQLPI FIDEYGYDYQ LAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	6e-21	NAC family protein