PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT60017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C3H | ||||||||
Protein Properties | Length: 82aa MW: 9172.17 Da PI: 4.549 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 39.8 | 7.8e-13 | 52 | 76 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++ C +++rtG+C yG+rC+F+H++ PHT60017.1 52 EPDCIYYLRTGFCGYGGRCRFNHPR 76 799********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence |
MERYSGTQAM EGAPVDPVSE WTVPGGETGL EEPMWQLSVG TGPEAYPERP NEPDCIYYLR 60 TGFCGYGGRC RFNHPRDRTS VK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06410.1 | 4e-29 | C3H family protein |