PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT59681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 330aa MW: 36112.7 Da PI: 8.7044 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160 | 9.6e-50 | 14 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 lppGfrF+Ptdeelvv+yLk+kv + +l++ ++i+ev++yk++PwdLp e+e yfFs+++ ky++g+r+nrat+sgyWkatg dk+++ k + PHT59681.1 14 LPPGFRFRPTDEELVVQYLKRKVFSFPLPA-SIIPEVEVYKSDPWDLPGD---MEQEKYFFSTKEVKYPNGNRSNRATTSGYWKATGIDKQIVMKsqqQ 108 79****************************.89***************54...46799***********************************986666 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++lvglkktLvfy+g++p+g +t+W+mheyrl PHT59681.1 109 QQLVGLKKTLVFYRGKSPHGCRTNWIMHEYRL 140 666***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 330 aa Download sequence |
MEKVDFVKNG VLRLPPGFRF RPTDEELVVQ YLKRKVFSFP LPASIIPEVE VYKSDPWDLP 60 GDMEQEKYFF STKEVKYPNG NRSNRATTSG YWKATGIDKQ IVMKSQQQQQ LVGLKKTLVF 120 YRGKSPHGCR TNWIMHEYRL ANFQSNNHPT QGNWVICRIF LKKRGTTKNE EENARNIGGA 180 VACIAEKKKK KKNALVFYDF MGRDNKNGTA ATTTSSSSTT SSGITDLTTN NEESDENVES 240 VAADVEFVAT DVESDGIHQT SLSGGFICSN SFSICCNINN NVFVFFGGGV GDLGVGIGGI 300 GGGLCGIGRG IGCGSGGPSV AMGERSVGRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 9e-85 | NAC family protein |