PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT59044.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 313aa    MW: 35406.2 Da    PI: 10.0083
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT59044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind304.53.9e-9313131301
   GAGA_bind   1 mdddgsre..rnkgyye................paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkl 81 
                 mdd g+re  r++  y                 +++++   +++++  + aerda+++er+ a++ekk+a+aer+ a +qrd+a+aer+ a+ erdn++
  PHT59044.1   1 MDDGGQREnkRHRMNYSkggyapwnvvppyqmrDQEAFI--MNTKIRMVFAERDAAVEERDRAVIEKKEALAEREFAIQQRDTAFAERDTAIKERDNAI 97 
                 899999888888886667999999999766554224455..8889999999************************************************ PP

   GAGA_bind  82 lalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkk 180
                 +al + e +++ +    +   +gtk  ++ ++ + ++ +ds    r+    +a+pi+   ++a ++ + k+ ++ +k+ + k+ k  +k++k k++ ++
  PHT59044.1  98 AALHFLESTMNGT---LSCRKRGTKRPNQPKN-HCNNSSDSVCINRDVPVADAFPISAISSDAGKALQGKR-SKVNKTMSMKSAKFPRKTKKVKEDLNR 191
                 *****99986533...3455677777776655.335556666667999999999*9999888888877774.444444444555544556666677777 PP

   GAGA_bind 181 esaderskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGyd 278
                 + + + skae++ +dl ++n++++Dest+P+PvC+CtG++rqCYkWG+GGWqS+CCtt +S yPLP+ +++r+ R++grKmS+++f++lL +La   +d
  PHT59044.1 192 QFSTDGSKAEWDAQDLgSVNQIQFDESTMPIPVCTCTGIPRQCYKWGSGGWQSSCCTTYLSEYPLPQLPNKRHGRLGGRKMSGSVFSRLLTRLALADHD 290
                 776788**********88********************************************************************************* PP

   GAGA_bind 279 lsnpvDLkdhWAkHGtnkfvtir 301
                 ls p+DLk++WAkHGtn+++ti+
  PHT59044.1 291 LSMPIDLKTYWAKHGTNRYITIK 313
                 **********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MDDGGQRENK RHRMNYSKGG YAPWNVVPPY QMRDQEAFIM NTKIRMVFAE RDAAVEERDR  60
AVIEKKEALA EREFAIQQRD TAFAERDTAI KERDNAIAAL HFLESTMNGT LSCRKRGTKR  120
PNQPKNHCNN SSDSVCINRD VPVADAFPIS AISSDAGKAL QGKRSKVNKT MSMKSAKFPR  180
KTKKVKEDLN RQFSTDGSKA EWDAQDLGSV NQIQFDESTM PIPVCTCTGI PRQCYKWGSG  240
GWQSSCCTTY LSEYPLPQLP NKRHGRLGGR KMSGSVFSRL LTRLALADHD LSMPIDLKTY  300
WAKHGTNRYI TIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-109BBR-BPC family protein