PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58733.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 345aa MW: 38869.4 Da PI: 7.6955

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.2	1.1e-55	11	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhP+deel+++yL +k++++++ ++++i +vd++k+ePwdLp k+k +ekewyfFs +d+ky+tg r+nrat+sgyWk+tgkdke++s ++el PHT58733.1 11 LPPGFRFHPSDEELITYYLVNKISDSTNFTARAIGDVDLNKSEPWDLPGKAKMGEKEWYFFSLKDRKYPTGVRTNRATNSGYWKTTGKDKEIFS-NSEL 108 79**********************9777799***********99999*************************************.99 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+grap+gekt+Wvmheyr+ PHT58733.1 109 VGMKKTLVFYRGRAPRGEKTNWVMHEYRI 137 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MEGEGREEID LPPGFRFHPS DEELITYYLV NKISDSTNFT ARAIGDVDLN KSEPWDLPGK 60 AKMGEKEWYF FSLKDRKYPT GVRTNRATNS GYWKTTGKDK EIFSNSELVG MKKTLVFYRG 120 RAPRGEKTNW VMHEYRIHSK SSYRTHKQDE WVVCRVFQKS GTAGGKKYPS SNNSSRIHMN 180 PYTTLDHINP NTICMSTQMM MPQAEHNAFQ LAMGRSSSSA YNMINHPEIQ ELHRVFRGVS 240 SSSNMMSLQP ILQSQMNYNL GGSSSGGGGD NCFTISGLNL NLGGGSGGAN TSQPVPQVMN 300 QQQDMMTTDH QSGYGEDMTS GNAMNRFMTM ENCAHDHLDN YWATY

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MEGEGREEID LPPGFRFHPS DEELITYYLV NKISDSTNFT ARAIGDVDLN KSEPWDLPGK  60
AKMGEKEWYF FSLKDRKYPT GVRTNRATNS GYWKTTGKDK EIFSNSELVG MKKTLVFYRG  120
RAPRGEKTNW VMHEYRIHSK SSYRTHKQDE WVVCRVFQKS GTAGGKKYPS SNNSSRIHMN  180
PYTTLDHINP NTICMSTQMM MPQAEHNAFQ LAMGRSSSSA YNMINHPEIQ ELHRVFRGVS  240
SSSNMMSLQP ILQSQMNYNL GGSSSGGGGD NCFTISGLNL NLGGGSGGAN TSQPVPQVMN  300
QQQDMMTTDH QSGYGEDMTS GNAMNRFMTM ENCAHDHLDN YWATY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-97	NAC family protein