PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT58492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 215aa MW: 23462 Da PI: 10.4888 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 189.8 | 3.2e-58 | 55 | 215 | 135 | 301 |
GAGA_bind 135 lpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSa 233 + + + +++k++ + k+ r+++ k k +++++ks++skk++ ++++ ++ +kk + s D s+lP+P CsCtG++r+CYk G GGWqS+ PHT58492.1 55 AKFKAKSQKIKKNMPPMKGIRETVSKLLKVERPENKSSASKKTKGEARCG-EATVTKKPKSV----ASADFSGLPPPFCSCTGVSRKCYKCG-GGWQSS 147 33445566667777777777778888888888877777777777776665.45555555554....589*********************99.9***** PP GAGA_bind 234 CCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 CCtt++S yPLP ++ ++g R++grKmS+ga++klL La+eG dlsnpvDLk+hWAkHG nkf ti+ PHT58492.1 148 CCTTSLSEYPLPWNPSKPGYRLTGRKMSNGAYNKLLFTLATEGCDLSNPVDLKNHWAKHGSNKFTTIK 215 *******************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MASQVNHKEE TFDSHFPRMH QVNFTPATKF GSESKPCAAV PIRSVAPTGG QNVNAKFKAK 60 SQKIKKNMPP MKGIRETVSK LLKVERPENK SSASKKTKGE ARCGEATVTK KPKSVASADF 120 SGLPPPFCSC TGVSRKCYKC GGGWQSSCCT TSLSEYPLPW NPSKPGYRLT GRKMSNGAYN 180 KLLFTLATEG CDLSNPVDLK NHWAKHGSNK FTTIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35550.3 | 4e-51 | BBR-BPC family protein |