PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT58190.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 288aa MW: 32655.9 Da PI: 9.0692

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT58190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	152	173	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C++ F+++ L +H H PHT58190.1 152 QCEICHRIFKTSQALGSHRTIH 173 7*****************9887 PP
2	zf-C2H2	11.5	0.00091	204	226	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cgk F + L H r+H PHT58190.1 204 HECPFCGKKFQSGQALGGHKRSH 226 79***********9999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MSLSMEKHKC KLCSKKFLSG KALGGHVRSH LIPLPLPPKS TPPLNQDSGS RSESTLSLCS 60 SENQQHLLEH VDFYYGLREN PKKSFRMIDP EFYESETESE RNPSNRKRFK GSPNKEKAAD 120 FVSLSLYSDE KDIAMCLMML SRDVWKNSKL NQCEICHRIF KTSQALGSHR TIHKIKNCNN 180 YEHEARKNSS KRKLASVKNA QKLHECPFCG KKFQSGQALG GHKRSHFVTM STSTTGSSSS 240 TTKFGDYSLM EYSNSADFPN GYIDLNMPAP MEGNDFSQVE FQQEQEFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	3e-27	C2H2 family protein