PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT58179.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 231aa    MW: 25539.5 Da    PI: 6.7908
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT58179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.3e-1950100256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g+
  PHT58179.1  50 LYHGVRRRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAAIAIKGH 100
                 69****887.**********843...6**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MEQHQSPTTF NNNKQTSSSS LTKRPITLTS SKQETNHKKN KKIDGSKHPL YHGVRRRSWG  60
KWVSEIREPR KKSRIWLGTF ATPEMAARAH DVAAIAIKGH VALLNFPELA HQFPKPASKC  120
AKDVQTAAAK AAALDISPRN SMEVPCSPYG ETESTESSLG SSNDDPFLDL PDLLMDLTQK  180
FDEVCHYNSS WDLAGAGAGA GSNDSCEFWP EEDLYLLDYS HGTALEVPQL Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-35ERF family protein