PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT57965.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 286aa    MW: 31722.6 Da    PI: 6.1586
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT57965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.71.4e-36301212102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++elisw+e+g++f+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k ll++i+
    PHT57965.1  30 FLTKTYQLVDDPTMDELISWNEDGTTFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANECFRRGEKGLLRDIQ 117
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    PHT57965.1 118 RRKI 121
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MVPSSVEQTG ESNTPAGAGA ENQRSLPTPF LTKTYQLVDD PTMDELISWN EDGTTFIVWK  60
PAEFARDLLP KYFKHNNFSS FVRQLNTYGF RKVVPDRWEF ANECFRRGEK GLLRDIQRRK  120
ISPAPAGTAV TPAVAAATPV MAVNAAQAVT VAVAPAVRXX XXRTAAAVLR MTTCTTTPDL  180
IEENERLRKE NAQLSQELNR LRGLCSNVYN LMSNFTANPA EIPAGIPEGR ALELLLSLGV  240
KRVRRSNEEE SDREGRSQDQ VQPHGSDVKS EPLDSGSAHH DDQQWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-66HSF family protein