PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57763.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 418aa MW: 47821.9 Da PI: 6.6454

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.3	1e-51	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PHT57763.1 15 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIHS-N 111 69**************************.9***********964443122456********************************99.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfykgrap+g+k+dW+mheyrl PHT57763.1 112 CKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143 889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MSKDMNLSVN GQSKVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI 60 QEKCRIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIHS NCKRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDNIQDS LNVNASESSN QEEGWVVCRV FKKKNYHKAL 180 ESPQNSSAAL SRSTIIQKPN NDGVLDQILM YMGRSSSCKQ QDFENKHNNN LLNNINSIHL 240 DDHIIQINST NSFINNNNRF IHLPGLENHH SPTNNMDDVS SLQLIQQDCC SFGEMLTENH 300 EHHDDLKTSP AVEMRWSHTS MVSGPSDWAS LDRLVASQLN GHDHVENITS NVENNNNNIC 360 FPLNHNGLQL GHLRTNGRPN DDDDAFSQSH AHDDDVEFWS YARSSSSSPS DPLCHLAV

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MSKDMNLSVN GQSKVPPGFR FHPTEEELLH YYLRKKVAYE KIDLDVIRDV DLNKLEPWDI  60
QEKCRIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIHS NCKRIGMRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDDNIQDS LNVNASESSN QEEGWVVCRV FKKKNYHKAL  180
ESPQNSSAAL SRSTIIQKPN NDGVLDQILM YMGRSSSCKQ QDFENKHNNN LLNNINSIHL  240
DDHIIQINST NSFINNNNRF IHLPGLENHH SPTNNMDDVS SLQLIQQDCC SFGEMLTENH  300
EHHDDLKTSP AVEMRWSHTS MVSGPSDWAS LDRLVASQLN GHDHVENITS NVENNNNNIC  360
FPLNHNGLQL GHLRTNGRPN DDDDAFSQSH AHDDDVEFWS YARSSSSSPS DPLCHLAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-103	NAC family protein