PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56515.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 348aa MW: 39946.6 Da PI: 5.0601

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.2	2.3e-55	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv +yL+kk++++k++l +vi+++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k PHT56515.1 8 VPPGFRFHPTDEELVGYYLRKKIASQKIDL-DVIRDIDLYRIEPWDLQdKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYN-K 104 69**************************.9***********943432233667**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle PHT56515.1 105 SKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MDTNESCVPP GFRFHPTDEE LVGYYLRKKI ASQKIDLDVI RDIDLYRIEP WDLQDKCRIG 60 YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYNKSKLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESEE NGPPQAKGWV VCRAFKKKIT GHTKTNMVEG WESNYFYDEA 180 TTAVSSVVDP LEYITRQPPP PSNFNMLQNN LLCKQEMEAA ENNPNFAYTN SDQFIQLPQL 240 ESPSLPLLKR PISSMSLVSD NNNNNNNNYE DDGSKNVTAD WRALDKFVAS QLSHDNHHEE 300 TSALYEDHDN YSDMGMLLLL SDRGEGPKLS EILSSSSEDC DIGVCSLI

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MDTNESCVPP GFRFHPTDEE LVGYYLRKKI ASQKIDLDVI RDIDLYRIEP WDLQDKCRIG  60
YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYNKSKLIGM RKTLVFYKGR  120
APNGQKSDWI MHEYRLESEE NGPPQAKGWV VCRAFKKKIT GHTKTNMVEG WESNYFYDEA  180
TTAVSSVVDP LEYITRQPPP PSNFNMLQNN LLCKQEMEAA ENNPNFAYTN SDQFIQLPQL  240
ESPSLPLLKR PISSMSLVSD NNNNNNNNYE DDGSKNVTAD WRALDKFVAS QLSHDNHHEE  300
TSALYEDHDN YSDMGMLLLL SDRGEGPKLS EILSSSSEDC DIGVCSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-142	NAC family protein