PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT56336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 507aa MW: 55271.9 Da PI: 7.912 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49 | 1.4e-15 | 73 | 117 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++ ++t+ q++s+ qk+ PHT56336.1 73 RERWTEEEHKKFLEALKLYGRA-WRRIEEHVS-TKTAVQIRSHAQKF 117 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence |
MFNSEMSLMV NNAIAPRDQS GESGVDSIHS SRNQISSDVG ASSTRIIKLK EQVASADEYA 60 PKVRKPYIIT KQRERWTEEE HKKFLEALKL YGRAWRRIEE HVSTKTAVQI RSHAQKFFSK 120 VVRESNNGDA NSVKPIEIPP PRPKRKPMHP YPRKLATPVI SETPVPEKST RSLSPNVSMS 180 EQANQSPTSV LSVHGSDALG TVDSSKCLGS ASPISSAGDG NGNSGGFVLS EPPPNSILED 240 SSSHVQANAK TNPENQAFVK LELFPQDDDF VQEGSAETSS TQCLKLFGKT VLFTESQKPS 300 CPTPGPCKIE TGLNDEASLP AVSWNVMPMK FTAADSECAS STLTLGTPSP FYILPSQNEI 360 KRPTGCASST LLPWGSSCAS ASFSCIQVLS PIPVKGRPIF NDRDLEDKQN QKEGSSTGSN 420 TEPVSAETGG DKNMDIETQS SRHPLEKMGK DRSSFRPRET FSLVQRASST KRIKGFIPYK 480 RCLTESGINS TTLSGEEREE QRTLLCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 6e-60 | MYB_related family protein |