PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55993.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 622aa MW: 68280.2 Da PI: 11.8507

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.2	7.2e-12	19	71	2	55
AP2 2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykG+r + ++gr + AeI p e ++ ++lg+++t++eAa+a+++ +k+l+g PHT55993.1 19 RYKGIRKRVRNGRirYGAEITKPGE---TRGIWLGTYDTEKEAAQAYDRVAKRLKG 71 69*********99999844...4******99***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MAEIENGNAA AAVPPNRVRY KGIRKRVRNG RIRYGAEITK PGETRGIWLG TYDTEKEAAQ 60 AYDRVAKRLK GPGAVLNFPN DDSSEKAEDE LNARSDVSDG GVKNNSNDIL PKNNRDNASP 120 SKAGDIAFTA EAGNIPSASK AGRSALRNWK PIQNPHFQAG RSALRILEPI QNPQAAHSKA 180 SCSTLRIREP INQNPQAPRP KAGGGVLRIR EPINQNPQAP RPKSGRGVLR IREPINQNPQ 240 APRPKSGRGV LRIREPINQN PQAPRPKSGR GVLRIREPIN QNPQAPRPKS GRGVLRIREP 300 INQNPQAPRP KSGRGVLRIR EPINQNPQAP RPKSGRGVLR IREPINQNPQ APRPKSGRGV 360 LRIREPINQN PQAPRPKSGR GVLRIREPIN QNPQAPRPKS GRGVLRIREP INQNPQAPRP 420 KSGRGVLRIR EPINQNPQAP RPKAGRGVLR IREPINQNPQ APRSKAGGGA LRIWEPINQN 480 PLAQAPGGAL RIVQEKNQNP QAPHFPADIA SSSKAGSNVL RNPEPNQNRQ VADPFPAVNA 540 GDAPSQLTDR EKYYVEIMKT AGALFPNPAD YRKAIVDCLR DFDNHVNANN VDNRESVLQD 600 QPPSTIAEDV DTELRLAPLG SK

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MAEIENGNAA AAVPPNRVRY KGIRKRVRNG RIRYGAEITK PGETRGIWLG TYDTEKEAAQ  60
AYDRVAKRLK GPGAVLNFPN DDSSEKAEDE LNARSDVSDG GVKNNSNDIL PKNNRDNASP  120
SKAGDIAFTA EAGNIPSASK AGRSALRNWK PIQNPHFQAG RSALRILEPI QNPQAAHSKA  180
SCSTLRIREP INQNPQAPRP KAGGGVLRIR EPINQNPQAP RPKSGRGVLR IREPINQNPQ  240
APRPKSGRGV LRIREPINQN PQAPRPKSGR GVLRIREPIN QNPQAPRPKS GRGVLRIREP  300
INQNPQAPRP KSGRGVLRIR EPINQNPQAP RPKSGRGVLR IREPINQNPQ APRPKSGRGV  360
LRIREPINQN PQAPRPKSGR GVLRIREPIN QNPQAPRPKS GRGVLRIREP INQNPQAPRP  420
KSGRGVLRIR EPINQNPQAP RPKAGRGVLR IREPINQNPQ APRSKAGGGA LRIWEPINQN  480
PLAQAPGGAL RIVQEKNQNP QAPHFPADIA SSSKAGSNVL RNPEPNQNRQ VADPFPAVNA  540
GDAPSQLTDR EKYYVEIMKT AGALFPNPAD YRKAIVDCLR DFDNHVNANN VDNRESVLQD  600
QPPSTIAEDV DTELRLAPLG SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15210.1	3e-13	ERF family protein