PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55852.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 404aa MW: 45693.7 Da PI: 5.834

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.4e-35	14	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX..XXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks..Fkkgkkellek 96 Fl+k+ye+++d++ + ++sws++++sf+v+++ +f++++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll++ PHT55852.1 14 FLTKTYEMVDDPSCDAIVSWSSSNKSFIVWNPPNFSRDLLPRYFKHNNFSSFIRQLNTYGFRKIDAEK---------WEFANEDnnFIRGQPHLLKN 101 9**************************************************************999.........998778******** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k PHT55852.1 102 IHRRKP 107 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MDEGACSTNA LPPFLTKTYE MVDDPSCDAI VSWSSSNKSF IVWNPPNFSR DLLPRYFKHN 60 NFSSFIRQLN TYGFRKIDAE KWEFANEDNN FIRGQPHLLK NIHRRKPVHS HSAQNLHGLS 120 SPLTESERQG YKEDIQKLKH ENGSLHLDLQ RHEQDHHGLE SQLQVLTERV QHVEHRQKTM 180 LSALARTLGN SVADLSHMPQ LQVNDRKRRL PGNSCLYTES DLEDTRGFSS KALTRKNMNP 240 SSLLTMNTER LDQLESSLTF WEDVLHNVDQ AGIQQNCSLE LDESRSCADS PAISYTQLDI 300 DVGPKASGID MNSEPNANPT PDASEPDDKA AAGTATIVPT GVNDVFWEQF LTENPVSEVQ 360 SERKDIASKK NENKPVDSAK YWWNMKSVNS LAEQLGHLTP AEKT

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MDEGACSTNA LPPFLTKTYE MVDDPSCDAI VSWSSSNKSF IVWNPPNFSR DLLPRYFKHN  60
NFSSFIRQLN TYGFRKIDAE KWEFANEDNN FIRGQPHLLK NIHRRKPVHS HSAQNLHGLS  120
SPLTESERQG YKEDIQKLKH ENGSLHLDLQ RHEQDHHGLE SQLQVLTERV QHVEHRQKTM  180
LSALARTLGN SVADLSHMPQ LQVNDRKRRL PGNSCLYTES DLEDTRGFSS KALTRKNMNP  240
SSLLTMNTER LDQLESSLTF WEDVLHNVDQ AGIQQNCSLE LDESRSCADS PAISYTQLDI  300
DVGPKASGID MNSEPNANPT PDASEPDDKA AAGTATIVPT GVNDVFWEQF LTENPVSEVQ  360
SERKDIASKK NENKPVDSAK YWWNMKSVNS LAEQLGHLTP AEKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-106	HSF family protein