PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT55681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 336aa MW: 38466.9 Da PI: 8.8191 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.4 | 1.9e-06 | 275 | 320 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ n Er+RR ++++ L+ ++P a +++ +++L +Av+Y+ksL PHT55681.1 275 TTSNCSERKRR-KLKKMVKALKGIVPGA-----SRMNTVTVLDEAVRYLKSL 320 678999***98.7**************9.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MLLSSQWLGL KTIIYCTGPI NMRWAFSSLS YCVKCVRFVI ARYPYFFFLK LKSTWRVRMY 60 IAITLKRYRA VKEAGEIKMH VGSVAYYQLM LVCQSNYHFS TQKPYVSLED QAAGGNIFDI 120 PPPSVYGTMA LPTGFRSSVP FHGFEFQSSE ACPKNFIIFD QTDYRSQIMY HPAMASKFPY 180 PDLNYNSTCF QDGMEKKIAN NENTEVSSYL KEDSDDINAL LSLEEEEHEE YDEEEVSTAR 240 TDANYGRSSP ESYSNYDCQS KKSRTSSFRK CSGSTTSNCS ERKRRKLKKM VKALKGIVPG 300 ASRMNTVTVL DEAVRYLKSL KVEVQKLGVE NLKTFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 2e-32 | bHLH family protein |