PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55590.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 324aa    MW: 36963.1 Da    PI: 6.5165
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66e-50371652128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kg 97 
                  pGfrFhPtdeelv +yL++kve+k++ l ++ik++diyk++PwdLp  + ++++kewyf++kr +ky+++ r+nr ++ sg+Wkatg dk+++s+ +g
  PHT55590.1  37 LPGFRFHPTDEELVGFYLRRKVEKKPIGL-DIIKQIDIYKYDPWDLPkGSNNNGDKEWYFYCKRGRKYKNSIRPNRvTAGSGFWKATGIDKPIYSSnDG 134
                 69*************************99.99***************446667899********************5556**************99778 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + +glkk+Lv+ykg+a kg+ktdW mhe+rl
  PHT55590.1 135 KCIGLKKSLVYYKGSAGKGTKTDWQMHEFRL 165
                 88***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MMEVEKISSS SSIVTNNYCN KGIDDDDDDD DDDDVVLPGF RFHPTDEELV GFYLRRKVEK  60
KPIGLDIIKQ IDIYKYDPWD LPKGSNNNGD KEWYFYCKRG RKYKNSIRPN RVTAGSGFWK  120
ATGIDKPIYS SNDGKCIGLK KSLVYYKGSA GKGTKTDWQM HEFRLPSQND AHTSTKHLHA  180
DTIPQEAETW TLCRILKRNA SYRKPIQDWK EVARKQQNDP VVNMDALSSK ICSNNNKDSP  240
SNNNSQIYIS FSTTPVVKQR PLIDYGYIKP NNQEFVGQQS NESAQSTAAA SSNSTSPVDF  300
NEWLEHGNWN ELTSIIELNC DLLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-69NAC family protein