PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55157.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 401aa MW: 45801 Da PI: 8.5168

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.6	4.4e-13	20	102	12	99
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ +++p f++eh+ k kt l++ +g sWe k+ ++ +s ++ ++ W +F + ++ ++gD+++F+l+++s+f +v +++k PHT55157.1 20 YTNKIRMPGAFVKEHK--KMLAKTCLLKTDEGLSWEAKI-VKETSHYFMCEGDWPRFLQHHKFESGDMLIFYLVEKSTF--HVLLYSK 102 4566899******7..457889***********.5666666999999******************987888..8877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MSMDPNNNHP SFSKLLQQGY TNKIRMPGAF VKEHKKMLAK TCLLKTDEGL SWEAKIVKET 60 SHYFMCEGDW PRFLQHHKFE SGDMLIFYLV EKSTFHVLLY SKKSLTNIRH FEELSSSDEE 120 EAAEEVKNVE ASRKAKKVKM EPVQLSYLGD KSDSKADNML GVEKKANEVK MEPVILSDSE 180 EERVDPSSDW GNPCYWHPGG KSNAKADNML GVKKKAPVKI FRELIELSDS EEETVDPFPG 240 SKEVGNPWCS HPGYKFNDKA DNTINVKKKA LWTKEAKKAA KDPNKHKMPA RCSFVKRGWK 300 SARDPNKPKK PAGAFFLFMK DFRKQFKEEN PKDISLAAGG VKWKQLSDAE KAPYMAEVKK 360 RMEEYCKNKA AYNRRVAAGD SDEEESYKSK SEVDEEEVGD D

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MSMDPNNNHP SFSKLLQQGY TNKIRMPGAF VKEHKKMLAK TCLLKTDEGL SWEAKIVKET  60
SHYFMCEGDW PRFLQHHKFE SGDMLIFYLV EKSTFHVLLY SKKSLTNIRH FEELSSSDEE  120
EAAEEVKNVE ASRKAKKVKM EPVQLSYLGD KSDSKADNML GVEKKANEVK MEPVILSDSE  180
EERVDPSSDW GNPCYWHPGG KSNAKADNML GVKKKAPVKI FRELIELSDS EEETVDPFPG  240
SKEVGNPWCS HPGYKFNDKA DNTINVKKKA LWTKEAKKAA KDPNKHKMPA RCSFVKRGWK  300
SARDPNKPKK PAGAFFLFMK DFRKQFKEEN PKDISLAAGG VKWKQLSDAE KAPYMAEVKK  360
RMEEYCKNKA AYNRRVAAGD SDEEESYKSK SEVDEEEVGD D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	324	KKPAGAFFLFMKDFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	5e-08	B3 family protein