PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55134.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 318aa    MW: 35547.5 Da    PI: 9.9652
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.6e-30247304359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p+++++tYe+eHnh+
  PHT55134.1 247 DDYSWRKYGQKPIKGSPHPRAYYKCSSVrGCPARKHVERALDEPTMLVVTYESEHNHS 304
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MAVELMMNYL NTARNTSSNF MTNMDDKAVV QEAASGLENV EKLIKLLSQK QGNLTSFLNR  60
EKSPPMKIEI AADAAITKFK KVNSLLDRSR TGHARFRRAP IDNLKKDYVD PKVYCPTPIQ  120
QLPPSPYDLN NNQIFQNPKQ ELVTKSINFS HAPEIWCANS FNMSTLTGET ESEQISNLSQ  180
VSSAVKPPLS SSSSFKIRKC TSSENGFSGK CSGSSGRCHC SKRRKLRPKR VVRVPAISMK  240
LSDIPPDDYS WRKYGQKPIK GSPHPRAYYK CSSVRGCPAR KHVERALDEP TMLVVTYESE  300
HNHSLSVAET SSLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.13e-70WRKY family protein