PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55063.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 254aa    MW: 29392.2 Da    PI: 7.6538
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.11.6e-4481372128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 
                  pGfrFhPt+eel+++yLk+ ++++kl+  ++i  ++iy ++Pw+Lp  +k+ ++e+ewyfF++ ++k+  + ++nr+t++g+Wkatg+d+++ s    
  PHT55063.1   8 LPGFRFHPTEEELINFYLKRIIDDNKLDS-NIIGFLNIYLSDPWELPglAKLGEREREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDRPIRSYldP 105
                 59*************************99.89***************6448888899************************************998878 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +glkktLvfy grapkg++tdWvm+eyrl
  PHT55063.1 106 KKIIGLKKTLVFYGGRAPKGSRTDWVMNEYRL 137
                 889***************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSPAELKLPG FRFHPTEEEL INFYLKRIID DNKLDSNIIG FLNIYLSDPW ELPGLAKLGE  60
REREWYFFVP INRKHGPKGK PNRTTRNGFW KATGSDRPIR SYLDPKKIIG LKKTLVFYGG  120
RAPKGSRTDW VMNEYRLPDE HKDHDIVLCK VYRKATSFKE LEQRATVEED TAKTYMPTRH  180
ESQDILGSLE SSKNDMYFKS CEEENYHTTL TLPQLSGSNA FVEPSKFSID SLSSPLWTEL  240
QNAGQDFWSL SSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.15e-77NAC family protein