PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT55063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 29392.2 Da PI: 7.6538 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.1 | 1.6e-44 | 8 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 pGfrFhPt+eel+++yLk+ ++++kl+ ++i ++iy ++Pw+Lp +k+ ++e+ewyfF++ ++k+ + ++nr+t++g+Wkatg+d+++ s PHT55063.1 8 LPGFRFHPTEEELINFYLKRIIDDNKLDS-NIIGFLNIYLSDPWELPglAKLGEREREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDRPIRSYldP 105 59*************************99.89***************6448888899************************************998878 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy grapkg++tdWvm+eyrl PHT55063.1 106 KKIIGLKKTLVFYGGRAPKGSRTDWVMNEYRL 137 889***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MSPAELKLPG FRFHPTEEEL INFYLKRIID DNKLDSNIIG FLNIYLSDPW ELPGLAKLGE 60 REREWYFFVP INRKHGPKGK PNRTTRNGFW KATGSDRPIR SYLDPKKIIG LKKTLVFYGG 120 RAPKGSRTDW VMNEYRLPDE HKDHDIVLCK VYRKATSFKE LEQRATVEED TAKTYMPTRH 180 ESQDILGSLE SSKNDMYFKS CEEENYHTTL TLPQLSGSNA FVEPSKFSID SLSSPLWTEL 240 QNAGQDFWSL SSLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 5e-77 | NAC family protein |