PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53523.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 262aa MW: 29981.8 Da PI: 7.9022

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.6	1.3e-45	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrF+Ptdee+v +yL +k+ + +l++ ++i+e++i+k++PwdLp + e++ yfFs+++ ky++g+r+nrat+ gyWk tg dk+++++ ++ PHT53523.1 14 LPPGFRFQPTDEEIVFQYLIRKTFSCPLPA-SIIPEINICKHDPWDLPGDI---EQDRYFFSNKEAKYRNGNRANRATRGGYWKPTGLDKQIICSkRKP 108 79**************************.89***********554...5689*****************************99974555 PP NAM 99 lvglkktLvfykg...rapkgektdWvmheyrl 128 vg+kktLvfykg +++++++tdW+mheyrl PHT53523.1 109 IVGMKKTLVFYKGkttTSHHATRTDWIMHEYRL 141 6******87222456678*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MDKFNFVKDG AIKLPPGFRF QPTDEEIVFQ YLIRKTFSCP LPASIIPEIN ICKHDPWDLP 60 GDIEQDRYFF SNKEAKYRNG NRANRATRGG YWKPTGLDKQ IICSKRKPIV GMKKTLVFYK 120 GKTTTSHHAT RTDWIMHEYR LAVIPNDSSS NFHGHFKKPS DQNSLVQIGN WVLCHIFLKK 180 RNGKCIQEIL EDDHHDDNYK AHEHSVQIAK PIVYYDFMRA DNLSDGSVTS SCSSSLSNDD 240 STEVSSSPSS LVEHEEATNQ PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-64	NAC family protein