PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT53330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 114aa MW: 12799.3 Da PI: 4.5888 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 53.3 | 1.2e-16 | 21 | 66 | 182 | 228 |
GAGA_bind 182 saderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnG 228 ++ +++ +++k +l ln++++Des++Pv vCsCtG+++ CYkWG PHT53330.1 21 KEADTQLTSWK-DNLWLNQINFDESAMPVMVCSCTGTPQPCYKWGHV 66 22244555666.58*******************************75 PP | |||||||
2 | GAGA_bind | 54.3 | 6.2e-17 | 66 | 114 | 255 | 301 |
GAGA_bind 255 iagrKmSqgafkklLekLaaeGydlsnpvDLkd..hWAkHGtnkfvtir 301 ++grKmS+gaf+klL++ aa+ ydls p+DLkd AkH tn++ t++ PHT53330.1 66 VGGRKMSGGAFSKLLNHFAAQDYDLSIPLDLKDsdQLAKHDTNRYNTLK 114 89******************************73369********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MQVIATISDD QANLLEMDSD KEADTQLTSW KDNLWLNQIN FDESAMPVMV CSCTGTPQPC 60 YKWGHVGGRK MSGGAFSKLL NHFAAQDYDL SIPLDLKDSD QLAKHDTNRY NTLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 3e-24 | BBR-BPC family protein |