PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT53124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 137aa MW: 15256.1 Da PI: 8.4509 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5.1e-18 | 13 | 61 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +y+G+r++k +g+Wv+eIr+p + r +lg++ t+e Aa a++ a +l+ PHT53124.1 13 KYRGIRRRK-WGKWVSEIRVP-----CssERLWLGTYTTPEAAAIAHDIAYYCLR 61 8*****998.**********8.....335***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MSSSDNEGAG SAKYRGIRRR KWGKWVSEIR VPCSSERLWL GTYTTPEAAA IAHDIAYYCL 60 RPKSSTSCLD KLNFPSMLPP NVQRGMSPRS VQKMASDSAI AIDAQFLTTA RPGQQDQTVD 120 NYGQNEALNI SVEDYLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 1e-42 | ERF family protein |