PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52812.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 272aa    MW: 31262.2 Da    PI: 6.8464
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.8e-3149101254
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                 prlrWtpeLHe F+eav+ LGG +kAtPk+i ++m vkgLt++hvkSHLQ+YR
  PHT52812.1  49 PRLRWTPELHELFIEAVQLLGGGHKATPKRIQQMMAVKGLTISHVKSHLQMYR 101
                 8**************************************************** PP
2Myb_DNA-binding605e-1950101148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++el+++av++lGgg   t+k+I ++m  kg+t  ++ks++q+y+
       PHT52812.1  50 RLRWTPELHELFIEAVQLLGGGhkaTPKRIQQMMAvKGLTISHVKSHLQMYR 101
                      89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MVHFYIYIYV LQVRTIPFIY VLMMEYFSMM KKRSSHKIGV RQYKKSSVPR LRWTPELHEL  60
FIEAVQLLGG GHKATPKRIQ QMMAVKGLTI SHVKSHLQMY RNLKEQASPN VVSSVNNFLE  120
ERPQFSWSSP RHVCETLEHR PSKSSNQINP GSDQSPYKAR VDAHSDQIAE NNIYCCDYQE  180
AQGSLSSGMT KEEEESGGPT SEICEFPEED GDSKRENNIW PLDDWVARCT KGSAEYSQSD  240
SSTKFLDQQV LQSPKDNSHI NLDLSISSYF YC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.14e-27G2-like family protein