PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52636.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 638aa MW: 69921 Da PI: 7.2251

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.2	1.3e-31	283	340	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k PHT52636.1 283 EDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-DGQITEIVYKGSHDHPK 340 7**************************************.*************85 PP
2	WRKY	104.9	4.1e-33	454	512	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct a+Cpv+k+ver+++dpk+v++tYeg+Hnh+ PHT52636.1 454 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNARCPVRKHVERASHDPKAVITTYEGKHNHD 512 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MRNIPNSIGY KVPYLSATSA LIYLANTIRP DIAFSVNLLA RYISALTKRH QNEIKHMSLF 60 YSKDCNFDLI DYADVGYLID LHKARSQIGY VFICNGTAIS WRYTKQSIVA TSSNHAEIIA 120 IHEAEPSPTT GSFSKFQLMQ GSSGSAAFSL MRNCSSGNAY GETTGEFEFE FPIGSSSTSG 180 SLAKEAVICS GFNQQQSEPL IQVQNRCPSQ SLARPALVKS EMPNSKELSL PTPVCLDASL 240 ISTAAAATDN EEINQRGQSN PSSHRSSADN KIVSSVTADR SSEDGYNWRK YGQKLVKGSE 300 FPRSYYKCTY PNCEVKKIFE RSPDGQITEI VYKGSHDHPK PQPNHRFTPG ALTSVQEDRG 360 EREACLTGQE DKFNTNAQTS NTEPSGTPLS PQQADDDGLE GTVSQLHSSN DQMDEDDSFA 420 KRRKMDGVMD IIPVVKPIRE PRVVVQTVSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC 480 TNARCPVRKH VERASHDPKA VITTYEGKHN HDVPTARTNS HEMAGSAPVT GSSRVRAEEN 540 GAISLDLGVG IGHGMENRCN GQLHTLPAES VRSQGQVSSS IVMVVQPAAV AACYSIVNGG 600 MNRFGTIENR VQGTGFETLP LQSSAQYPQN YGMILLGP

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MRNIPNSIGY KVPYLSATSA LIYLANTIRP DIAFSVNLLA RYISALTKRH QNEIKHMSLF  60
YSKDCNFDLI DYADVGYLID LHKARSQIGY VFICNGTAIS WRYTKQSIVA TSSNHAEIIA  120
IHEAEPSPTT GSFSKFQLMQ GSSGSAAFSL MRNCSSGNAY GETTGEFEFE FPIGSSSTSG  180
SLAKEAVICS GFNQQQSEPL IQVQNRCPSQ SLARPALVKS EMPNSKELSL PTPVCLDASL  240
ISTAAAATDN EEINQRGQSN PSSHRSSADN KIVSSVTADR SSEDGYNWRK YGQKLVKGSE  300
FPRSYYKCTY PNCEVKKIFE RSPDGQITEI VYKGSHDHPK PQPNHRFTPG ALTSVQEDRG  360
EREACLTGQE DKFNTNAQTS NTEPSGTPLS PQQADDDGLE GTVSQLHSSN DQMDEDDSFA  420
KRRKMDGVMD IIPVVKPIRE PRVVVQTVSE VDILDDGYRW RKYGQKVVRG NPNPRSYYKC  480
TNARCPVRKH VERASHDPKA VITTYEGKHN HDVPTARTNS HEMAGSAPVT GSSRVRAEEN  540
GAISLDLGVG IGHGMENRCN GQLHTLPAES VRSQGQVSSS IVMVVQPAAV AACYSIVNGG  600
MNRFGTIENR VQGTGFETLP LQSSAQYPQN YGMILLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-130	WRKY family protein