PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52363.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 373aa MW: 39163.2 Da PI: 6.6279

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.6e-12	177	222	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y++ Lq PHT52363.1 177 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVRFLQ 222 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEAMNSSSFH SSGENGEHDD FLQQILSSVP SSSSPWPDIG DAHPYNFDND HHHHNSSLLA 60 SKLRQQQING KALMLQQQQQ QLLMSRGLTG DQNDDALNQG NEISVQALYN GFAGSLGQTS 120 NQSQHFHHSQ TQSFGAPASL TTNQTPAVSG GSAGGGGGAQ PKQQKVRARR GQATDPHSIA 180 ERLRRERIAE RMKSLQELVP NANKTDKASM LDEIIDYVRF LQLQVKVLSM SRLGGAAAVA 240 PLVADRSSEG GGDCVQANVA RGISNGTTSS TNNDNTMTMT EHQVAKLMEE DMGSAMQYLQ 300 GKGLCLMPIS LATAISTATC HSMKPNNHSL LLGRGDGGGG VVNGGGGENG GGPSSPTLSA 360 STVQSATMGN GGT

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEAMNSSSFH SSGENGEHDD FLQQILSSVP SSSSPWPDIG DAHPYNFDND HHHHNSSLLA  60
SKLRQQQING KALMLQQQQQ QLLMSRGLTG DQNDDALNQG NEISVQALYN GFAGSLGQTS  120
NQSQHFHHSQ TQSFGAPASL TTNQTPAVSG GSAGGGGGAQ PKQQKVRARR GQATDPHSIA  180
ERLRRERIAE RMKSLQELVP NANKTDKASM LDEIIDYVRF LQLQVKVLSM SRLGGAAAVA  240
PLVADRSSEG GGDCVQANVA RGISNGTTSS TNNDNTMTMT EHQVAKLMEE DMGSAMQYLQ  300
GKGLCLMPIS LATAISTATC HSMKPNNHSL LLGRGDGGGG VVNGGGGENG GGPSSPTLSA  360
STVQSATMGN GGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	187	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-57	bHLH family protein