PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT51704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 330aa MW: 36950.8 Da PI: 7.1238 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.5 | 2.5e-32 | 191 | 248 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fpr+YYrCt+++C+vkk+vers ed ++v++tYeg+Hnh+ PHT51704.1 191 EDGYRWRKYGQKAVKNSPFPRNYYRCTTQKCSVKKRVERSYEDASIVITTYEGQHNHH 248 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MSDNPFYHDY MGTSGGINTF PFFGENPSNF HDQPIIPNIQ NPNHEHQFVP SSYMTLTECL 60 HGSMDYNTLS SVFGMSCSSS SEVVCPHIDN QGSTRKSSVS ATAEPILDSP MGDQTSVEVP 120 PTPNSSISST SNEAGGQEDS SKIKKHMQNK DGQEGRDDKS KKECKAKKKG EKKVKEPRFA 180 FMTKSEIDNL EDGYRWRKYG QKAVKNSPFP RNYYRCTTQK CSVKKRVERS YEDASIVITT 240 YEGQHNHHCP AALRGNASFL SSPHFMPSFP PQLFSQMLIP PTSNQNLLIT SEAYNNINNN 300 NYHQQNQGSE YNLFGGGTND ASWIQKQEPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46350.1 | 3e-45 | WRKY family protein |