PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51542.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 378aa    MW: 40081.7 Da    PI: 6.6481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-202877255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++aa+++++g
  PHT51542.1 28 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAAREFRG 77
                6********.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MAMKEKVNGG MKVANSKCNG VNNNKDVHYR GVRKRPWGRY AAEIRDPGKK SRVWLGTFDT  60
AEEAAKAYDA AAREFRGCKA KTNFPLPSEN QNGSDSGSPD ESFSGENCAH APSEFELTRC  120
LGAGGEGVGN GGRLAEVGLV RNGDAIVHAP TELDLTRLLG AGGEGGDNSG YSAEVGLVRN  180
GFPIFHHQPP IEGPMMSNRS SPAESSSGET IINALQAPPE LYLMRRLVAG GDGDCNGGHS  240
AKVGYPFFHH QLSMAAPSAS STGETVVNAP HAPPELDHTR RLGAVVQGAG YVSNGFPVFH  300
QQPAMAVLPN GQPMLLFDGN FVRTGLLNRP QPYQFEPVPA QLNSVTGRVG HSETDSSSVG  360
LSRRELNLDL NLAPPMEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.16e-29ERF family protein