PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51295.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 390aa MW: 44094.6 Da PI: 7.1761

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.2	7.6e-54	22	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp+ +k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +++ PHT51295.1 22 LPPGFRFHPTDEELITFYLASKVFNGSFCG-IQIAEVDLNRCEPWELPEVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAtNKA 119 79***********************877.67***********8888999***********************************96778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+kktLvfykgrap+gekt+Wvmheyrl PHT51295.1 120 LLGMKKTLVFYKGRAPRGEKTKWVMHEYRL 149 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MMLAMEEILC ELNREDENGQ GLPPGFRFHP TDEELITFYL ASKVFNGSFC GIQIAEVDLN 60 RCEPWELPEV AKMGEREWYF FSLRDRKYPT GLRTNRATGA GYWKATGKDR EVYSATNKAL 120 LGMKKTLVFY KGRAPRGEKT KWVMHEYRLD GDFSYRYSSK EEWVICRILH KVGIGEKKNP 180 ILYEAGGGYP TLKTWSSAAA STFHNTALNS PLAPNPKTST NNTTTLWQKQ QAESLQILHN 240 SSAVQSLQNL YLFHPHENDL LKSLFINSNN NNVSQTNLFP MNNNNGTTPT INNTATTKQD 300 HVDTNKNSSN MLFINQQLCT SSKKNEAETM KTEGNYSGCY INDQNAYGMM NISDWSSLGG 360 MEGISCNFNN NVVMDNCPIK IAAESWPLNL

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MMLAMEEILC ELNREDENGQ GLPPGFRFHP TDEELITFYL ASKVFNGSFC GIQIAEVDLN  60
RCEPWELPEV AKMGEREWYF FSLRDRKYPT GLRTNRATGA GYWKATGKDR EVYSATNKAL  120
LGMKKTLVFY KGRAPRGEKT KWVMHEYRLD GDFSYRYSSK EEWVICRILH KVGIGEKKNP  180
ILYEAGGGYP TLKTWSSAAA STFHNTALNS PLAPNPKTST NNTTTLWQKQ QAESLQILHN  240
SSAVQSLQNL YLFHPHENDL LKSLFINSNN NNVSQTNLFP MNNNNGTTPT INNTATTKQD  300
HVDTNKNSSN MLFINQQLCT SSKKNEAETM KTEGNYSGCY INDQNAYGMM NISDWSSLGG  360
MEGISCNFNN NVVMDNCPIK IAAESWPLNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	5e-99	NAC family protein