PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51172.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 1193aa MW: 133716 Da PI: 5.1651

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.1	1.4e-09	865	939	38	128
NAM 38 diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + y ++P++L+ + +fF++r+++ + tk+g W+a+g e+++ +++ g ++t+ f + +ap ekt W+++ey++ PHT51172.1 865 NPYLYDPSNLQ-------DGAWFFVRRAEE--------KETKHGLWRAKGVACEIFA-NSAISGWRTTFEFSQIQAPIEEKTVWMIQEYKI 939 56667777775.......345567766554........35789************.999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1193 aa Download sequence
MVPRLHCQQF IHFDEEGKLK EAFSIRYECC EALDMKFWYG CQKPTFVVTY KEDNKNARHV 60 KAYEVPLENG PNIEQREICY YKHIPLFPEL PESESIIWEK LLLHQPFHSY VTLLSILARA 120 MEIRRYDNLG PIANFCLVDC EKLGQHQVLT CSGAYKDGSL RIARNKIGIH EQVSVELRGI 180 KGMWSLRSAT DDSYDSFLVV SFIDVTRFYQ IVLDETSREG FTSLSLAEAS IEGFNSDVQT 240 LFCHQAVYDQ LVLVTPNSVR LVNSVSKHMK TEWFAPGPLT VATAKATQIL LATTVGGHQL 300 LVCLTIGNGV LKEMASIKLG GDVSCLDINP ITAKANSSIF AAVGMWEDNS VNIYALPKLD 360 FIGKENLGRV DSLPHSILMC SLYGSSYLLC GLSDGHLMHF ELNMTTGELT GRKKVSIGNQ 420 PVTLCTFLSK EATRVVAASN SLMVIYSNNK KILYSEVNNI EGVIHMSPYN VEAFPNMLAI 480 AKEGQLAICT IDEKQKLHII HSEHLGEYVR YISHQEQSRT IAVCSITYEG GNQTDRLVCL 540 FDDQTFQRKS TYIFDQFEYG CSILSCSFSD DNNVYYCVGT AYVMPNQNEL TKGRILILQV 600 VLDGEFQLVA QMETNGAVYS LNAFNGKLLA AINQNIQLYK WASCEFGRGR KLQPECLYRS 660 RVLSLYVQTR GDFIVGGDLV MSISLLICKQ DKGEYVIEQL AYHSATNWMS AVEILNEQHK 720 HLEVAGTFYL GEFVTRFRQG PLVTLSQDSE MIPTVIFGTV NGVIGVIASL PQKQHNFLET 780 LQSKLGKVIK GVGELSNEQW RTCWCWQRRR SIDTTNFVDG DLIESFLNLS KNQKEEIAQE 840 MEVTFGDLVK INRGSPIPDD VIVDNPYLYD PSNLQDGAWF FVRRAEEKET KHGLWRAKGV 900 ACEIFANSAI SGWRTTFEFS QIQAPIEEKT VWMIQEYKIT LKGQHDQTKS QESALCRVFS 960 CCNETKPEQR DDLDTLDFLS LMSVFELHTS SSDGQRSIGE PQVNSQAEGV VSSLIDKSGD 1020 HSDDDCILRR DYLELNDLVD AASHSSSSES SSRPSFASDE YFDSMALLRD LDDDEKKEDL 1080 NGNGSNGSYN TMTCVLQPAP LESLVKGSEA AAEETQQAPA INKSEPPSET STDQAAKRLK 1140 AERTDEGPSH SCRPTTSSSS SSSSSSDEPG RVATRAEKRT KKLMKYFLCF IPF

Sequence ? help Back to Top

Protein Sequence Length: 1193 aa Download sequence

MVPRLHCQQF IHFDEEGKLK EAFSIRYECC EALDMKFWYG CQKPTFVVTY KEDNKNARHV  60
KAYEVPLENG PNIEQREICY YKHIPLFPEL PESESIIWEK LLLHQPFHSY VTLLSILARA  120
MEIRRYDNLG PIANFCLVDC EKLGQHQVLT CSGAYKDGSL RIARNKIGIH EQVSVELRGI  180
KGMWSLRSAT DDSYDSFLVV SFIDVTRFYQ IVLDETSREG FTSLSLAEAS IEGFNSDVQT  240
LFCHQAVYDQ LVLVTPNSVR LVNSVSKHMK TEWFAPGPLT VATAKATQIL LATTVGGHQL  300
LVCLTIGNGV LKEMASIKLG GDVSCLDINP ITAKANSSIF AAVGMWEDNS VNIYALPKLD  360
FIGKENLGRV DSLPHSILMC SLYGSSYLLC GLSDGHLMHF ELNMTTGELT GRKKVSIGNQ  420
PVTLCTFLSK EATRVVAASN SLMVIYSNNK KILYSEVNNI EGVIHMSPYN VEAFPNMLAI  480
AKEGQLAICT IDEKQKLHII HSEHLGEYVR YISHQEQSRT IAVCSITYEG GNQTDRLVCL  540
FDDQTFQRKS TYIFDQFEYG CSILSCSFSD DNNVYYCVGT AYVMPNQNEL TKGRILILQV  600
VLDGEFQLVA QMETNGAVYS LNAFNGKLLA AINQNIQLYK WASCEFGRGR KLQPECLYRS  660
RVLSLYVQTR GDFIVGGDLV MSISLLICKQ DKGEYVIEQL AYHSATNWMS AVEILNEQHK  720
HLEVAGTFYL GEFVTRFRQG PLVTLSQDSE MIPTVIFGTV NGVIGVIASL PQKQHNFLET  780
LQSKLGKVIK GVGELSNEQW RTCWCWQRRR SIDTTNFVDG DLIESFLNLS KNQKEEIAQE  840
MEVTFGDLVK INRGSPIPDD VIVDNPYLYD PSNLQDGAWF FVRRAEEKET KHGLWRAKGV  900
ACEIFANSAI SGWRTTFEFS QIQAPIEEKT VWMIQEYKIT LKGQHDQTKS QESALCRVFS  960
CCNETKPEQR DDLDTLDFLS LMSVFELHTS SSDGQRSIGE PQVNSQAEGV VSSLIDKSGD  1020
HSDDDCILRR DYLELNDLVD AASHSSSSES SSRPSFASDE YFDSMALLRD LDDDEKKEDL  1080
NGNGSNGSYN TMTCVLQPAP LESLVKGSEA AAEETQQAPA INKSEPPSET STDQAAKRLK  1140
AERTDEGPSH SCRPTTSSSS SSSSSSDEPG RVATRAEKRT KKLMKYFLCF IPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	2e-08	NAC family protein