PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51171.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 378aa    MW: 42077.7 Da    PI: 4.7233
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.51.3e-106311872128
         NAM  72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + +++ tk+g+W a+g+  e+++ +++  g ++t+ f + +ap  +kt W+m+ey++
  PHT51171.1  63 TTEEKETKHGRWIAKGSACEIFA-NSAISGWRTTFEFSQVQAPIEQKTVWMMQEYKV 118
                 4567789****************.999****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MHPLAPSTPP PGFTSSYWTN DEIILSLDQI NRGSPIPDDL IVDNPYQYDT SNLPDGAWFL  60
VKTTEEKETK HGRWIAKGSA CEIFANSAIS GWRTTFEFSQ VQAPIEQKTV WMMQEYKVTP  120
KGQHGPTKSQ DSALCRVFSC CSETKPEKNS DFDTKGELQV VCFSCLAYAF VCCYSPQKFF  180
QVNNQTEGVG SSLVDKPRDH SDDIAADLDC ILREDYLELD DLASHSSSSE NSSRLSFASE  240
EYFDYLALLR DLDDDAKKKD LNGNGSTDNY NIMMCVLAND AAVQLAPLES LVKGSEATAV  300
KETPQAPDNN KTKSFSEQFP DHSAKRLKAE RTDEGPSHSC RATTSSSSSS SGDEPGRVAR  360
REEKRAKKFT KYLCFMPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-09NAC family protein